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4 search results found

What_the_phage ⭐ 96

WtP: Phage identification via nextflow and docker or singularity

Phigaro is a scalable command-line tool for predicting phages and prophages

zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)

Phage-Host Interaction Search Tool

Identify phage regions in bacterial genomes for masking purposes

Awesome Phages ⭐ 14

A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.

Phagehosts ⭐ 11

This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computational approaches to predict bacteriophage–host relationships. FEMS Microbiology Reviews doi: 10.1093/femsre/fuv048

Software to predict the occurence of programmed ribosomal frameshifting in bacterial, phage, and viral genomes

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