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14 search results found

What_the_phage ⭐ 96

WtP: Phage identification via nextflow and docker or singularity

Phanotate ⭐ 58

PHANOTATE: a tool to annotate phage genomes.

Phigaro is a scalable command-line tool for predicting phages and prophages

zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)

Phage-Host Interaction Search Tool

Mobileog Db ⭐ 15

code repo for mobileOG-db

Identify phage regions in bacterial genomes for masking purposes

Awesome Phages ⭐ 14

A curated list of phage related software and computational resources for phage scientists, bioinformaticians and enthusiasts.

Phagehosts ⭐ 11

This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computational approaches to predict bacteriophage–host relationships. FEMS Microbiology Reviews doi: 10.1093/femsre/fuv048

Onepetri ⭐ 11

Accelerate common Petri dish assays with AI.

Hannigan_crcvirome_mbio_2018 ⭐ 8

Investigating the gut virus communities associated with colon cancer.

Onepetri Models ⭐ 6

Repository containing trained YOLOv5 object detection models used within OnePetri for Petri dish and plaque detection.

Cenote_unlimited_breadsticks ⭐ 6

DEPRECATED: Discover divergent virus sequences, prune flanking cellular sequences, make basic report

Software to predict the occurence of programmed ribosomal frameshifting in bacterial, phage, and viral genomes

Related Searches

Bioinformatics Phage (11)

Genome Phage (6)

Genomics Phage (4)

Bacteria Phage (4)

Python Phage (3)

Virus Phage (3)

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