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Search results for bioinformatics pathway analysis
bioinformatics
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pathway-analysis
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16 search results found
Pathway Mapper
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52
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Newt
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48
A web application to visualize and edit pathway models
Causalpath
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27
A project for exploring differentially active signaling paths related to proteomics datasets
Reactomepy
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19
Explore biomolecular pathways in Reactome from the command-line or a Python script
Pathme
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17
Harmonizing pathway databases using Biological Expression Language (BEL)
Chise.js
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14
A web application to visualize and edit the pathway models represented by SBGN Process Description Notation
Biocor
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14
Package to calculate functional similarity between genes https://biocor.llrs.dev
Pathway Forte
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10
A Python package for benchmarking pathway database with functional enrichment and classification methods
Egsea
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9
This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
Gsea Api
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8
Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
Compath Resources
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7
This repository contains the different resources derived or generated using ComPath
Flexgsea R
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7
Flexible gene set enrichment analysis
Py Sspa
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7
Single sample pathway analysis tools for omics data
Compath
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6
A web application for exploring, analyzing, and curating pathway databases
Syblars
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6
SyBLaRS: Systems Biology Layout & Rendering Service
Results
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5
Results of the evaluation of pathway databases using TCGA datasets
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