Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for graph assembly
assembly
x
graph
x
44 search results found
Gonum
⭐
6,979
Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more
Flye
⭐
672
De novo assembler for single molecule sequencing reads using repeat graphs
Asmspy
⭐
608
Simple command line assembly reference checker
Hifiasm
⭐
443
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Gfa Spec
⭐
176
Graphical Fragment Assembly (GFA) Format Specification
Avaloniagraphcontrol
⭐
166
A graph layout panel for AvaloniaUI
Rust Mdbg
⭐
149
minimizer-space de Bruijn graphs (mdBG) for whole genome assembly
Generative 3d Part Assembly
⭐
125
Generative 3D Part Assembly via Dynamic Graph Learning, NeurIPS 2020
Arcs
⭐
86
🌈Scaffold genome sequence assemblies using linked or long read sequencing data
Metagraph
⭐
81
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
Ntjoin
⭐
74
🔗Genome assembly scaffolder using minimizer graphs
Minia
⭐
65
Minia is a short-read assembler based on a de Bruijn graph
Hinge
⭐
57
Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"
Agb
⭐
50
Interactive visualization of assembly graphs
Algorithmimplementations
⭐
47
Implementation of Elementary Algorithms (infix-prefix-postfix-evaluation-to-longest-common
Recycler
⭐
41
This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33 by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir
Gfapy
⭐
39
Gfapy: a flexible and extensible software library for handling sequence graphs in Python
Reveal
⭐
39
Graph based multi genome aligner
Novograph
⭐
36
NovoGraph: building whole genome graphs from long-read-based de novo assemblies
Cortex
⭐
32
reference free variant assembly
Wtdbg
⭐
30
A fuzzy Bruijn graph approach to long noisy reads assembly
Dependency Analyser
⭐
29
Shows the dependencies between .NET projects and assemblies as a graph.
Thesis
⭐
28
my PhD thesis
As2cfg
⭐
27
Construct the CFG(Control Flow Graph) from intel assembly code
Dependencygraph
⭐
24
C# Dependency Graph based on Reflection
Ida_plugin
⭐
24
An IDA Pro Plugin to extract Call Graphs and Control Flow Graphs from an assembly file written in Python.
Callgraph Gen
⭐
23
Generating the call graph from elf binary file
Graphunzip
⭐
23
Unzip assembly graphs with Hi-C data and/or long reads.
Metagenomescope
⭐
22
Visualization tool for (meta)genome assembly graphs
Asgan
⭐
20
A tool for analysis of assembly graphs
Dotnet Assembly Grapher
⭐
20
Reverse engineering and software quality assurance tool for .NET assemblies
W2rap
⭐
18
WGS (Wheat) Robust Assembly Pipeline
Coursera_data_structures_and_algorithms_specialization
⭐
16
My solution to Data Structures and Algorithms Specialization (Algorithmic Toolbox; Data Structures; Algorithms on Graphs; Algorithms on Strings; Advanced Algorithms and Complexity; Genome Assembly Programming Challenge)
Grazelle Ppopp18
⭐
15
Artifact for PPoPP 2018 paper "Making Pull-Based Graph Processing Performant"
Viral Assembly
⭐
13
exploring viral genome assembly with variation graph tools
Assembly Graph
⭐
13
Compare assembly graph file formats
Assembly_line
⭐
12
Contiguity
⭐
11
Tool for visualising assemblies.
Minys
⭐
11
MineYourSymbiont : Targetted genome assembly for metagenomics pipeline.
Shenzhen.io Assembler
⭐
11
A silly little transpiler/assembler for SHENZHEN I/O, a rad programming game by Zachtronics.
Interceptor
⭐
10
Hook windows code with _penter and _pexit ( Unicode, Multi byte, 32 bit , 64 bit)
Visdasm
⭐
10
Building Assembly Control Flow Graph at Runtime Using Python
Petojson
⭐
8
Serialize PE to Json based on PE-Parse
Ptolemy
⭐
8
Spades Contig Graph
⭐
7
a tool for creating a FASTG contig graph from a SPAdes assembly
Cbgb
⭐
6
Coloured de Bruijn Graph Builder
Sh Assembly
⭐
5
K-mer counting with low memory consumption enables de novo assembly of 106x human sequence data in 2.7 hours
V8_puzzles
⭐
5
Progcalc
⭐
5
A programmer's calculator for KnightOS
Abyss Scaffold Paper
⭐
5
Scaffolding a genome sequence assembly using ABySS
Related Searches
Python Graph (6,271)
Javascript Graph (3,671)
Java Graph (2,154)
C Plus Plus Graph (2,047)
Algorithms Graph (1,701)
Graph Edge (1,528)
C Sharp Assembly (1,475)
Network Graph (1,265)
Jupyter Notebook Graph (1,166)
Graph Visualization (962)
1-44 of 44 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.