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The Top 23 Python Neuroimaging Fmri Open Source Projects

Open source projects categorized as Python Neuroimaging Fmri
Categories > Fmri
Categories > Machine Learning > Neuroimaging
Nilearn ⭐ 1,076
Machine learning for NeuroImaging in Python
most recent commit 3 months ago
Pycortex ⭐ 534
Pycortex is a python-based toolkit for surface visualization of fMRI data
dependent packages 1total releases 14most recent commit 5 months agopypi pycortex} Downloads
Brainiak ⭐ 315
Brain Imaging Analysis Kit
total releases 15most recent commit 5 months ago
Tedana ⭐ 149
TE-dependent analysis of multi-echo fMRI
dependent packages 4total releases 21most recent commit 3 months agopypi tedana} Downloads
Dyconnmap ⭐ 89
A dynamic connectome mapping module in python.
total releases 3most recent commit 10 months ago
Visualqc ⭐ 68
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
total releases 30most recent commit 7 months ago
Halfpipe ⭐ 56
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
most recent commit 3 months ago
Stagin ⭐ 55
STAGIN: Spatio-Temporal Attention Graph Isomorphism Network
most recent commit 10 months ago
Fmriflows ⭐ 42
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
most recent commit 2 years ago
Samri ⭐ 39
Small Animal Magnetic Resonance Imaging via Python.
most recent commit 7 months ago
Ni Edu ⭐ 36
Student version of NI-edu courses
most recent commit 9 months ago
Actflowtoolbox ⭐ 29
The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network simulations and machine learning prediction. Helps determine how connections contribute to specific brain functions.
total releases 7most recent commit 5 months ago
Brainplotlib ⭐ 25
A lightweight package to plot brain surfaces with Python.
total releases 8most recent commit 9 months ago
Nibabies ⭐ 19
Processing tools for magnetic resonance images of infant brains
total releases 25most recent commit 4 months ago
Junifer ⭐ 12
Forschungszentrum Jülich Neuroimaging Feature Extractor
total releases 108most recent commit 4 months ago
Bids Tools ⭐ 11
Tools for dealing with neuroimaging data in the BIDS structure
most recent commit 5 years ago
Fmri_roi_analysis_tool ⭐ 10
An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usage includes the creation of regional maps of temporal signal to noise ratio.
total releases 33most recent commit 5 months ago
Sdc Bids Fmri ⭐ 9
fMRI Imaging Analysis
most recent commit 3 years ago
Pypes ⭐ 9
Reusable neuroimaging pipelines using nipype
most recent commit 5 years ago
Hed Specification ⭐ 8
Specification documents for HED (Hierarchical Event Descriptors)
most recent commit 4 months ago
Hed Python ⭐ 7
Python validation, summary, and analysis tools for HED (Hierarchical Event Descriptors).
total releases 5most recent commit 6 months ago
Aroma ⭐ 7
ICA-AROMA, as a Python package. A work in progress.
most recent commit a year ago
Afniglmprep ⭐ 5
afniGLMprep is python code which prepares and runs GLMs on neuroimaging data stored in the BIDS format (http://bids.neuroimaging.io/). This is done via AFNI's 3dDeconvolve function.
most recent commit 4 years ago
The 2 Most Depended On Python Neuroimaging Fmri Open Source Projects
Tedana ⭐ 149
TE-dependent analysis of multi-echo fMRI
dependent packages 4total releases 21latest release November 21, 2023most recent commit 3 months agopypi tedana} Downloads
Pycortex ⭐ 534
Pycortex is a python-based toolkit for surface visualization of fMRI data
dependent packages 1total releases 14latest release July 20, 2023most recent commit 5 months agopypi pycortex} Downloads
The 10 Latest Releases In Python Neuroimaging Fmri Open Source Projects
Junifer ⭐ 12
Forschungszentrum Jülich Neuroimaging Feature Extractor
total releases 108latest release December 04, 2023most recent commit 4 months ago
Nibabies ⭐ 19
Processing tools for magnetic resonance images of infant brains
total releases 25latest release November 22, 2023most recent commit 4 months ago
Tedana ⭐ 149
TE-dependent analysis of multi-echo fMRI
dependent packages 4total releases 21latest release November 21, 2023most recent commit 3 months agopypi tedana} Downloads
Hed Python ⭐ 7
Python validation, summary, and analysis tools for HED (Hierarchical Event Descriptors).
total releases 5latest release October 27, 2023most recent commit 6 months ago
Pycortex ⭐ 534
Pycortex is a python-based toolkit for surface visualization of fMRI data
dependent packages 1total releases 14latest release July 20, 2023most recent commit 5 months agopypi pycortex} Downloads
Visualqc ⭐ 68
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
total releases 30latest release April 12, 2023most recent commit 7 months ago
Brainplotlib ⭐ 25
A lightweight package to plot brain surfaces with Python.
total releases 8latest release February 14, 2022most recent commit 9 months ago
Brainiak ⭐ 315
Brain Imaging Analysis Kit
total releases 15latest release October 15, 2020most recent commit 5 months ago
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