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The Top 23 Neuroimaging Fmri Open Source Projects

Open source projects categorized as Neuroimaging Fmri
Categories > Fmri
Categories > Machine Learning > Neuroimaging
Nilearn ⭐ 1,076
Machine learning for NeuroImaging in Python
most recent commit 3 months ago
Fmriprep ⭐ 599
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
dependent packages 1total releases 178most recent commit 14 days agopypi fmriprep} Downloads
Pycortex ⭐ 534
Pycortex is a python-based toolkit for surface visualization of fMRI data
dependent packages 1total releases 14most recent commit 4 months agopypi pycortex} Downloads
Brainiak ⭐ 315
Brain Imaging Analysis Kit
total releases 15most recent commit 5 months ago
Tedana ⭐ 149
TE-dependent analysis of multi-echo fMRI
dependent packages 4total releases 21most recent commit 3 months agopypi tedana} Downloads
Canlabcore ⭐ 135
Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.
most recent commit 3 months ago
Braingraph ⭐ 94
Graph theory analysis of brain MRI data
dependent packages 2total releases 11most recent commit 3 years ago
Dyconnmap ⭐ 89
A dynamic connectome mapping module in python.
total releases 3most recent commit 10 months ago
Mmvt ⭐ 80
The Multi-Modality Visualization Tool (MMVT) is built for researchers who wish to have a better understanding of their neuroimaging anatomical and spatio-temporal data
most recent commit a year ago
Automaticanalysis ⭐ 70
Automatic Analysis (aa)
most recent commit 4 months ago
Visualqc ⭐ 68
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
total releases 30most recent commit 6 months ago
Halfpipe ⭐ 56
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
most recent commit 3 months ago
Stagin ⭐ 55
STAGIN: Spatio-Temporal Attention Graph Isomorphism Network
most recent commit 9 months ago
Spm ⭐ 50
SPM (Statistical Parametric Mapping) - Development Version
most recent commit 3 months ago
Network_tda_tutorial ⭐ 43
This repository is dedicated for the tutorial on network and topological neuroscience.
most recent commit 9 months ago
Advanced_fmri_course ⭐ 43
List of ressources and practicals used for the fMRI data analysis course of UoB (UK) (2014-2017)
most recent commit a year ago
Fmriflows ⭐ 42
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
most recent commit 2 years ago
Samri ⭐ 39
Small Animal Magnetic Resonance Imaging via Python.
most recent commit 7 months ago
Ni Edu ⭐ 36
Student version of NI-edu courses
most recent commit 9 months ago
Ecobidas ⭐ 35
Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist
most recent commit 3 months ago
Actflowtoolbox ⭐ 29
The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network simulations and machine learning prediction. Helps determine how connections contribute to specific brain functions.
total releases 7most recent commit 4 months ago
Brainplotlib ⭐ 25
A lightweight package to plot brain surfaces with Python.
total releases 8most recent commit 9 months ago
Niak ⭐ 24
GNU Octave library for connectivity analysis in large fMRI datasets
most recent commit 3 years ago
The 4 Most Depended On Neuroimaging Fmri Open Source Projects
Tedana ⭐ 149
TE-dependent analysis of multi-echo fMRI
dependent packages 4total releases 21latest release November 21, 2023most recent commit 3 months agopypi tedana} Downloads
Braingraph ⭐ 94
Graph theory analysis of brain MRI data
dependent packages 2total releases 11latest release September 29, 2020most recent commit 3 years ago
Pycortex ⭐ 534
Pycortex is a python-based toolkit for surface visualization of fMRI data
dependent packages 1total releases 14latest release July 20, 2023most recent commit 4 months agopypi pycortex} Downloads
The 10 Latest Releases In Neuroimaging Fmri Open Source Projects
Junifer ⭐ 12
Forschungszentrum Jülich Neuroimaging Feature Extractor
total releases 108latest release December 04, 2023most recent commit 3 months ago
Nibabies ⭐ 19
Processing tools for magnetic resonance images of infant brains
total releases 25latest release November 22, 2023most recent commit 3 months ago
Tedana ⭐ 149
TE-dependent analysis of multi-echo fMRI
dependent packages 4total releases 21latest release November 21, 2023most recent commit 3 months agopypi tedana} Downloads
Hed Python ⭐ 7
Python validation, summary, and analysis tools for HED (Hierarchical Event Descriptors).
total releases 5latest release October 27, 2023most recent commit 6 months ago
Pycortex ⭐ 534
Pycortex is a python-based toolkit for surface visualization of fMRI data
dependent packages 1total releases 14latest release July 20, 2023most recent commit 4 months agopypi pycortex} Downloads
Visualqc ⭐ 68
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
total releases 30latest release April 12, 2023most recent commit 6 months ago
Brainplotlib ⭐ 25
A lightweight package to plot brain surfaces with Python.
total releases 8latest release February 14, 2022most recent commit 9 months ago
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