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The Top 23 Crispr Open Source Projects

Open source projects categorized as Crispr
Categories > Crispr
Awesome Crispr ⭐ 431
List of software/websites/databases/other stuff for genome engineering
most recent commit 7 months ago
Crispresso ⭐ 110
Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
dependent packages 1total releases 51most recent commit 5 years agopypi CRISPResso} Downloads
Minced ⭐ 80
Mining CRISPRs in Environmental Datasets
most recent commit a year ago
Crisprcastyper ⭐ 55
CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
total releases 34most recent commit 2 years ago
Xplain ⭐ 43
🌎 Complex Topics Explained For Your Level And Background. ✏️
most recent commit 4 years ago
Crass ⭐ 34
The CRISPR assembler
most recent commit 3 years ago
Spacepharer ⭐ 28
SpacePHARER CRISPR Spacer Phage-Host pAiRs findER
most recent commit a year ago
Ice ⭐ 28
Synthego ICE - Inference of CRISPR Editing software
total releases 4most recent commit 4 years ago
Guide Counter ⭐ 22
A better, faster way to count guides in CRISPR screens.
most recent commit a year ago
Cell Health ⭐ 21
Predicting Cell Health with Morphological Profiles
most recent commit 2 years ago
Crop Seq ⭐ 19
Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)
most recent commit 6 years ago
Crisprseq ⭐ 17
A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).
most recent commit 5 months ago
Gemini ⭐ 14
GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens
most recent commit 2 years ago
Crisprdesign ⭐ 14
Comprehensive design of CRISPR gRNAs for nucleases and base editors
most recent commit 6 months ago
Alleleanalyzer ⭐ 13
A software tool for personalized and allele-specific CRISPR editing.
most recent commit 2 years ago
Beditor ⭐ 11
[Currently undergoing renovations] A computational workflow for designing libraries of guide RNAs for CRISPR base editing
total releases 18most recent commit a year ago
Guidescan Cli ⭐ 10
A gRNA database generation tool.
most recent commit 9 months ago
Genet ⭐ 8
Python library for genome editing and CRISPR research
total releases 37most recent commit 5 months ago
Jacks ⭐ 8
Analysis package for processing counts from genome-wide CRISPR/Cas9 screens
most recent commit 4 years ago
Crispr_dart ⭐ 7
A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data
most recent commit 2 years ago
Dtrace ⭐ 7
Integration of pharmacological and drop-out CRISPR-Cas9 screens
most recent commit 3 years ago
Crispr Bean ⭐ 7
Accurate variant effect estimation from Bayesian network and base editing reporters
most recent commit 6 months ago
Addtag Project ⭐ 6
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
most recent commit 3 years ago
The 5 Latest Releases In Crispr Open Source Projects
Genet ⭐ 8
Python library for genome editing and CRISPR research
total releases 37latest release November 24, 2023most recent commit 5 months ago
Crisprcastyper ⭐ 55
CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
total releases 34latest release December 16, 2022most recent commit 2 years ago
Ice ⭐ 28
Synthego ICE - Inference of CRISPR Editing software
total releases 4latest release February 22, 2021most recent commit 4 years ago
Crispresso ⭐ 110
Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
dependent packages 1total releases 51latest release June 30, 2018most recent commit 5 years agopypi CRISPResso} Downloads
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