Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Jbrowse | 437 | 1 | 2 | a year ago | 30 | July 12, 2019 | 164 | other | JavaScript | |
Full-featured and stable genome browser built with JavaScript and HTML5. | ||||||||||
Run_dbcan | 109 | 4 months ago | 17 | December 20, 2021 | 26 | gpl-3.0 | Python | |||
Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes. | ||||||||||
Epiviz | 66 | a year ago | 27 | other | JavaScript | |||||
EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features. | ||||||||||
Nolabs | 30 | 5 months ago | 2 | mit | Python | |||||
Open source biolab | ||||||||||
Bioqueue | 28 | a year ago | apache-2.0 | Python | ||||||
A novel pipeline framework to accelerate bioinformatics analysis | ||||||||||
Scaffold_builder | 12 | 3 years ago | 1 | gpl-3.0 | Python | |||||
Combining de novo and reference-guided assembly with Scaffold_builder | ||||||||||
Agebioportal | 7 | 6 years ago | 2 | mit | R | |||||
R Shiny web application for aging-related diseases | ||||||||||
Nanoforms | 6 | a year ago | gpl-3.0 | JavaScript | ||||||
The repository contains the source code of the NanoForms server (Czmil et al. NanoForms: an integrated server for processing, analysis and assembly of raw sequencing data of microbial genomes, from Oxford Nanopore technology. PeerJ, 2022). It is meant to be the source for standalone server installation. https://doi.org/10.7717/peerj.13056 | ||||||||||
Slim | 6 | 2 years ago | agpl-3.0 | JavaScript | ||||||
A web app for environmental DNA metabarcoding analysis | ||||||||||
Modloop | 5 | 4 months ago | lgpl-2.1 | Python | ||||||
Web server for automated modeling of loops in protein structures |