Python_scripts
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Biopandas | 673 |  | 3 | 20 | 8 months ago | 20 | August 28, 2023 | 25 | bsd-3-clause | Python |
| Working with molecular structures in pandas DataFrames | ||||||||||
| Biojava | 564 | 96 | 16 | 3 months ago | 56 | June 02, 2023 | 71 | lgpl-2.1 | Java | |
| :book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data. | ||||||||||
| Plip | 320 |  | 2 | 1 | 9 months ago | 25 | August 18, 2023 | 34 | gpl-2.0 | Python |
| Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294 | ||||||||||
| Pdb Tools | 319 |  | 1 | 5 | 5 months ago | 38 | June 23, 2022 | 17 | apache-2.0 | Python |
| A dependency-free cross-platform swiss army knife for PDB files. | ||||||||||
| P2rank | 193 | 4 months ago | 15 | mit | Groovy | |||||
| P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure. | ||||||||||
| Biosyntax | 184 | 3 years ago | 8 | gpl-3.0 | Shell | |||||
| Syntax highlighting for computational biology | ||||||||||
| Rna Tools | 129 | 4 months ago | 110 | November 22, 2023 | 36 | gpl-3.0 | Jupyter Notebook | |||
| 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online | ||||||||||
| Freesasa | 95 | 5 months ago | 3 | mit | C | |||||
| C-library for calculating Solvent Accessible Surface Areas | ||||||||||
| Biostructures.jl | 77 | 4 months ago | 3 | other | Julia | |||||
| A Julia package to read, write and manipulate macromolecular structures (particularly proteins) | ||||||||||
| Mitos.jl | 64 | 3 months ago | December 21, 2017 | 11 | other | Julia | ||||
| Mutual Information Tools for protein Sequence analysis in Julia | ||||||||||
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