Bionitio Python
Demonstrating best practices for bioinformatics command line tools
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Teachingmaterial | 161 | 3 years ago | HTML | |||||||
| Various teaching material | ||||||||||
| Assembly Stats | 92 | a year ago | other | C++ | ||||||
| Get assembly statistics from FASTA and FASTQ files | ||||||||||
| Cogent3 | 79 |  | 2 | 3 months ago | 18 | September 22, 2023 | 35 | bsd-3-clause | Python | |
| Comparative Genomics Toolkit 3 | ||||||||||
| Contextualized | 60 | a month ago | 8 | May 13, 2023 | 38 | gpl-3.0 | Python | |||
| A statistical machine learning toolbox for estimating models, distributions, and functions with sample-specific parameters. | ||||||||||
| Faster | 28 | 3 months ago | 1 | mit | Rust | |||||
| A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust | ||||||||||
| Review | 23 | 9 months ago | 8 | cc0-1.0 | ||||||
| :earth_americas: Review materials for bioinformatics, computational biology, and science in general | ||||||||||
| Amidd | 23 | 4 months ago | 3 | TeX | ||||||
| Introduction to Applied Mathematics and Informatics in Drug Discovery (AMIDD) | ||||||||||
| Proxysnps | 21 | 6 years ago | 10 | mit | R | |||||
| :bookmark: Get SNP proxies from the 1000 Genomes Project. | ||||||||||
| Samstat | 20 | 9 months ago | 4 | other | C | |||||
| SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format. | ||||||||||
| Bionitio Python | 18 | 4 years ago | 5 | mit | Python | |||||
| Demonstrating best practices for bioinformatics command line tools | ||||||||||
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Python
Statistics
Bioinformatics