Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
---|---|---|---|---|---|---|---|---|---|---|
Nextflow | 2,447 | 16 | 3 months ago | 250 | November 24, 2023 | 336 | apache-2.0 | Groovy | ||
A DSL for data-driven computational pipelines | ||||||||||
Covalent | 608 | 2 | 3 months ago | 118 | December 01, 2023 | 84 | apache-2.0 | Python | ||
Pythonic tool for running machine-learning/high performance/quantum-computing workflows in heterogeneous environments. | ||||||||||
Ppl | 56 | 3 months ago | 3 | November 27, 2023 | apache-2.0 | Rust | ||||
Parallelo Parallel Library (PPL) is a small parallel framework that brings Structured Parallel Programming in Rust. | ||||||||||
Covalent Slurm Plugin | 26 | 3 months ago | 4 | May 26, 2022 | 11 | apache-2.0 | Python | |||
Executor plugin interfacing Covalent with Slurm | ||||||||||
Hipipe | 17 | 8 months ago | 4 | mit | C++ | |||||
Super fast C++17 data transformation pipeline (with Python interface). | ||||||||||
Chia Pipe | 13 | 3 years ago | 1 | mit | C | |||||
ChIA-PIPE: A fully automated pipeline for comprehensive ChIA-PET data analysis and visualization | ||||||||||
Variant Calling Pipeline | 11 | 4 years ago | Shell | |||||||
HPC based pipelines for variant calling using GATK | ||||||||||
Miseq 16s Pipeline | 11 | 9 years ago | mit | Python | ||||||
HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq | ||||||||||
Hyperloom | 9 | 5 years ago | 1 | other | C++ | |||||
Platform for defining and executing scientific pipelines in distributed environments | ||||||||||
Samba | 6 | 2 years ago | Perl | |||||||
An HPC cluster-based pipeline for atlas creation, voxel- and label-based analysis (and more!) |