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Search results for visualization transcriptomics
transcriptomics
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visualization
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18 search results found
Cellxgene
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544
An interactive explorer for single-cell transcriptomics data
Isee
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217
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
Mudan
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66
Multi-sample Unified Discriminant ANalysis
Cirrocumulus
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63
Bring your single-cell data to life
Tomicsvis
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50
Transcriptomics Visualization R package.
Awesome Biological Visualizations
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41
A list of web-based interactive biological data visualizations.
Cellxgene Gateway
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40
Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.
Asap
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24
ASAP : Automated Single-cell Analysis Pipeline
Gssplayground
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21
Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), add synteny among genome fragments or add crosslink among features, add short(PE/MP)/long reads(pacbio or nanopore) mapping or snpindel in vcf(not support complex sv yet), support all CIGAR of sam alignment, directly modify almost all features in Chrome by click the feature
Scrattch.vis
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17
scRNA-seq data visualization from scrattch
Digitalcellsorter
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14
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:
Feser
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11
feseR: Combining feature selection methods for analyzing omics data
Tbro
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10
Visualization and management of denovo transcriptomes
Scplot
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8
Single cell interactive plotting tools
Trendcatcher
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7
TrendCatcher is an open source R-package that allows users to systematically analyze and visualize time course data. Please cite "Temporal transcriptomic analysis using TrendCatcher identifies early and persistent neutrophil activation in severe COVID-19" by Xinge Wang et al published in JCI Insight (2022) - https://insight.jci.org/articles/view/157255
Glue Genes
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7
glue for genomics and transcriptomics
Matrixqcvis
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5
Genexvis
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5
An application for exploring and visualizing differential gene expression data created with DESeq2
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1-18 of 18 search results
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