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Search results for visualization rna seq
rna-seq
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visualization
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18 search results found
Dittoseq
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153
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
Startapp
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71
The START App: R Shiny Transcriptome Analysis Resource Tool
Tomicsvis
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50
Transcriptomics Visualization R package.
Cellxgene Gateway
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40
Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.
Asap
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24
ASAP : Automated Single-cell Analysis Pipeline
Sgtk
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21
Example of SGTK application for E.coli dataset:
Tbro
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10
Visualization and management of denovo transcriptomes
Geneexpressionaging
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10
Gene expression viewer template
Nasqar
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10
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Enrichment_analysis
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10
A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, and GSEApy.
Deseq2shiny
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8
a web-based R shiny application that wraps DESeq2 R package
Debpeak
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8
DEbPeak - Analyze and integrate multi-omics to unravel the regulation of gene expression.
Trendcatcher
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7
TrendCatcher is an open source R-package that allows users to systematically analyze and visualize time course data. Please cite "Temporal transcriptomic analysis using TrendCatcher identifies early and persistent neutrophil activation in severe COVID-19" by Xinge Wang et al published in JCI Insight (2022) - https://insight.jci.org/articles/view/157255
Top 10
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5
top 10 challenges in dat science
Genexvis
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5
An application for exploring and visualizing differential gene expression data created with DESeq2
Genome_tracks
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5
A Snakemake workflow for easy visualization of genome browser tracks of aligned BAM files powered by the wrapper gtracks for the package pyGenomeTracks.
Genocraft
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5
GenoCraft: A Comprehensive, User-Friendly Web-Based Platform for High-Throughput Omics Data Analysis and Visualization
Scdva
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5
An R shiny based tool used for single cell RNA-seq data visualization and analysis.
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1-18 of 18 search results
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