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Search results for virus sars cov 2

15 search results found

Serratus ⭐ 219

Ultra-deep search for novel viruses

Nextclade ⭐ 190

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

V-pipe is a pipeline designed for analysing NGS data of short viral genomes

Covid19 Review ⭐ 117

A collaborative review of the emerging COVID-19 literature. Join the chat here:

Viralrecon ⭐ 101

Assembly and intrahost/low-frequency variant calling for viral samples

Bioexplorer ⭐ 61

The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.

Co2_monitor ⭐ 30

An open-source CO2 monitor helping to ensure a healthy environment in a class room and slowing down the spread of the corona SARS-CoV-2 virus.

compare sequences to a shared root reference sequence.

Viral Mcorr ⭐ 16

Using correlated substitutions to infer recombination rates in RNA viruses

Covid19 Lab Results ⭐ 11

Parsing lab results pertaining to SARS-CoV-2 (causes COVID-19) and other respiratory viruses

Sars Cov 2 Queries ⭐ 10

Wikidata Queries around the SARS-CoV-2 virus and pandemic

Info/Data (global/italy) about COVID-19. PR welcome for other countries.

Ont Analysis Toolkit ⭐ 6

A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.

Freeform Virus Blinky ⭐ 5

Freeform electronics sculpture of a SARS-CoV-2 virus that blinks it's own RNA sequence.

Nf Ncov Voc ⭐ 5

A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https://github.com/cidgoh/COVID-MVP) which can be used to visualize the mutation profiles and functional annotations.

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