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Search results for virus nextflow

7 search results found

Viralrecon ⭐ 101

Assembly and intrahost/low-frequency variant calling for viral samples

Emg Viral Pipeline ⭐ 98

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

compare sequences to a shared root reference sequence.

Vampirus ⭐ 10

Automated virus amplicon sequencing analysis program integrated with Nextflow pipeline manager.

Assembly and intrahost / low-frequency variant calling for viral samples

Viralintegration ⭐ 9

Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.

Nf Ncov Voc ⭐ 5

A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https://github.com/cidgoh/COVID-MVP) which can be used to visualize the mutation profiles and functional annotations.

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1-7 of 7 search results

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