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6 search results found

Copy number calling and variant classification using targeted short read sequencing

R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

Titancna ⭐ 59

Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer

Palimpsest ⭐ 56

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.

Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data

Genetic Heterogeneity Profiling by Single Cell RNA Sequencing

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1-6 of 6 search results

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