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Search results for suffix array
suffix-array
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26 search results found
Deprecated Data Structures
⭐
2,646
A collection of powerful data structures
Seqan
⭐
444
SeqAn's official repository.
Lzsa
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209
Byte-aligned, efficient lossless packer that is optimized for fast decompression on 8-bit micros
Libsais
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133
libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.
Sdsl Lite
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70
Succinct Data Structure Library 3.0
Cello
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69
A string library
Lz4ultra
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49
Optimal LZ4 compressor, that produces files that decompress faster while keeping the best compression ratio
Deltaq
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39
Fast and portable delta encoding for .NET in 100% safe, managed code.
Fuzzy Match
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35
Library and command line utility to do approximate string matching of a source against a bitext index and get matched source and target.
Bsdiff
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29
Binary delta tools and library
Esa Matchfinder
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22
The esa-matchfinder is a C99 library for efficient Lempel-Ziv factorization using enhanced suffix array (ESA).
Msufsort
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21
msufsort parallel suffix array construction algorithm
Qbsdiff
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21
fast and memory saving bsdiff 4.x compatible delta compressor and patcher
Gsufsort
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21
gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]
Libcubwt
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20
libcubwt is a library for GPU accelerated suffix array and burrows wheeler transform construction.
Gsa Is
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18
Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]
Saca Bench
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18
Collection of Suffix Array Construction Algorithms (SACAs)
Bsdiff
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17
bsdiff is a library for building and applying patches to binary files.
Egsa
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11
Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]
Zultra
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9
Fast deflate implementation with zopfli-like ratios and a streaming API
Stringsearch
⭐
8
Collection of techniques for (binary) string searching
Sais Lite Lcp
⭐
8
Induced Suffix Array and LCP construction based on the SAIS algorithm.
Sacak Lcp
⭐
8
Optimal suffix sorting and LCP array construction for constant alphabets [IPL 2017]
Caps Sa
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6
Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays
Fmalign2
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5
FMAlign2: A novel fast multiple nucleotide sequence alignment method for ultra-long datasets
Fsais
⭐
5
External memory suffix array construction using inducing
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1-26 of 26 search results
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