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SeqAn's official repository.

Sdsl Lite ⭐ 70

Succinct Data Structure Library 3.0

Fuzzy Match ⭐ 35

Library and command line utility to do approximate string matching of a source against a bitext index and get matched source and target.

Msufsort ⭐ 21

msufsort parallel suffix array construction algorithm

Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays

FMAlign2: A novel fast multiple nucleotide sequence alignment method for ultra-long datasets

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