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Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

Cancer metastasis detection with neural conditional random field (NCRF)

Program for the analysis and visualization of whole-slide images in digital pathology

Openslide ⭐ 365

C library for reading virtual slide images

Dsmil Wsi ⭐ 224

DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image

Camicroscope ⭐ 191

Digital pathology image viewer with support for human/machine generated annotations and markups.

Tcga_segmentation ⭐ 57

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

Compay Syntax ⭐ 48

🔬 Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.

Digital Pathology Whole Slide Image Analysis Toolbox

Tissueloc ⭐ 39

Whole Slide Digital Pathology Image Tissue Localization

Demo_wsi_superres ⭐ 8

WSISR: Single image super-resolution for Whole slide Imaging using convolutional neural networks and self-supervised color normalization.

Lks Dataset ⭐ 7

This is the official repo for the Liver Kidney Stomach dataset introduced in the paper: SOS: Selective Objective Switch for Rapid Immunofluorescence Whole Slide Image Classification.

Labelstrip ⭐ 7

GUI wrapped around anonymise label for SVS and NDPI whole slide images

Gleason_grade ⭐ 5

Code for gleason grading a whole slide in 1 minute or less

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