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The Multi-Modality Visualization Tool (MMVT) is built for researchers who wish to have a better understanding of their neuroimaging anatomical and spatio-temporal data

Micapipe ⭐ 69

micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

Open Brain Consent ⭐ 38

Making neuroimaging open from the grounds (consent form) and up (tools)

KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.

Neuro_docker ⭐ 9

A Dockerfile to create a Ubuntu docker for neuroimaging

Ironsmithqsm ⭐ 8

Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM based iron concentrations from subcortical and cortical brain regions and evaluating the quality of QSM data using SNR measures and assessment of outlier regions on phase images.

Automatedfreesurfer ⭐ 5

Freesurfer_parallel_scripts ⭐ 5

Shell scripts to run FreeSurfer's recon-all in parallel on multi-core machines.

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