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Search results for sequencing consensus

10 search results found

Gencore ⭐ 103

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

Ngspeciesid ⭐ 41

Reference-free clustering and consensus forming of long-read amplicon sequencing

Genome Data Integration ⭐ 35

Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls

Alignparse ⭐ 15

Align sequences and then parse features.

Sc2 Illumina Pipeline ⭐ 14

Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub

Sars Cov 2_multi Pcr_v1.0 ⭐ 12

SARS-CoV-2 analysis pipeline for multiplex-PCR MPS(Massive Parrallel Sequencing) data

Ervcaller ⭐ 11

ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposable elements (TEs) in the human genome using next-generation sequencing (NGS) data. We evaluated the tools using both simulated and real benchmark whole-genome sequencing (WGS) datasets. ERVcaller is capable to accurately detect various TE insertions of any lengths, particularly ERVs. It allows for the use of a TE reference library regardless of sequence complexi

A python-based isomiR quantification and analysis pipeline

duplicate read inferred sequencing error estimator

Flea Pipeline ⭐ 5

A pipeline for long-read sequencing data.

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