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Search results for ruby genome
genome
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17 search results found
Genometools
⭐
261
GenomeTools genome analysis system.
Flo
⭐
82
Same species annotation lift over pipeline.
Miga
⭐
29
MiGA: Microbial Genomes Atlas
Ruby_warrior_nn_solution
⭐
26
evolved neural network solution to rubywarrior
Kittyverse
⭐
17
kittyverse libraries & scripts - helper classes for cattributes, trait types, traits, genes, genomes and more for cryptokitties and copycats
Bioruby Ucsc Api
⭐
17
Ruby UCSC API: An API for the UCSC Genome Database
Genomer
⭐
16
A Swiss army knife for genome projects
Gee_fu
⭐
16
An extensible Ruby on Rails web-service application and database for visualising HTGS data
Viptreegen
⭐
15
a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree
Parp
⭐
15
Processing Abnormal Read-Pairs
Oo_genetic_algorithm
⭐
12
Object Oriented GA in Ruby - A flexible experimetal platform
Micro_ga
⭐
11
Genetic Algorithm in Ruby in < 30 lines
Mcsmrt
⭐
11
Microbiome Classifier Pipeline for Pacific Biosciences 16s Data
Locustree
⭐
8
Ruby library to search genomic loci
Scaffolder
⭐
7
Genome scaffolding for human beings.
Synteny Based Annotator
⭐
6
This collection of scripts will provide annotations for hypothetical proteins and poorly-annotated prokaryotic genes. If you are a microbiologist with a newly sequenced genome, I highly recommend this script. The citation for the paper on the method development can be found here: Yelton, A.P., Thomas B.C., Simmons, S.L., Wilmes P., Zemla A., Thelen M.P., Justice N., Banfield J.F. A semi-quantitative, synteny-based method to improve functional predictions
Scaffolder Tools
⭐
5
Set of tools for manipulating sequence assemblies specified by yaml configuration files.
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