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Search results for ribosome profiling
ribosome-profiling
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11 search results found
Ribocode
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28
release version
Ribotricer
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26
A tool for accurately detecting actively translating ORFs from Ribo-seq data
Ribotish
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16
Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data
Riboflow
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12
Pipeline for Ribosome Profiling Data
Piperiboseq
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10
A comprehensive pipeline for Ribo-seq data analysis
Riboraptor
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9
Tool for ribo-seq analysis
Riborex
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8
Riborex: Fast and flexible identification of differential translation from Ribo-seq data
Hribo
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8
We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ribo-seq data. The workflow performs all required pre-processing steps and quality control. Importantly, HRIBO outputs annotation-independent ORF predictions based on two complementary prokaryotic-focused tools, and integrates them with additional computed features. This facilitates both the rapid discovery of ORFs and their prioritization for functional charact
Uorf Tools
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6
uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)
Ribotricer Results
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6
Results and scripts for benchmarking ribotricer for translating ORF detection from Ribo-seq data
Ribo Oddr
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5
Ribo-seq focused Oligo Design pipeline for experiment-specific Depletion of Ribosomal RNAs
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