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Search results for r quality control

quality-control x
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32 search results found
Minion_qc ⭐ 174
Quality control for MinION sequencing data
Gwas_scripts ⭐ 127
Codebook from my GWAS cookbook
Dimred ⭐ 74
A Framework for Dimensionality Reduction in R
Ggqc ⭐ 38
ggQC
Nanor ⭐ 38
Nanopore data analysis in R
Qcc ⭐ 38
An R package for Quality Control Charts
Runcharter ⭐ 32
Automating run chart analysis for faceted displays of data across multiple metrics or locations
Qc ⭐ 32
Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
Plinkqc ⭐ 31
R package for quality control of plink genetic datasets
Prolfqua ⭐ 29
R package for protein differential expression analysis
Gwaspipeline ⭐ 26
Spccharter ⭐ 24
Creates multiple SPC / process behaviour charts, automatically detecting signals of process change and revising centre lines and control limits.
Atacseqqc ⭐ 22
ATAC-seq Quality Control
Cacao ⭐ 22
Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer
Qrqc ⭐ 18
Quick Read Quality Control
Metax ⭐ 14
metaX: a flexible and comprehensive software for processing omics data.
Sixsigma ⭐ 13
SixSigma R package
Riboseqc ⭐ 12
Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
Gwastools ⭐ 10
Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis
Immuneaging2017 ⭐ 8
Code for Celia and Nils' immune aging project.
Visualizationqualitycontrol ⭐ 7
Visualization methods for omics dataset quality control
Tag Seq ⭐ 6
3’ Tag RNA-seq pipeline (Work in progress)
Nacho ⭐ 6
NAnostring quality Control dasHbOard
Methylumi ⭐ 6
Qckit ⭐ 6
QCkit provides useful functions for data quality control and manipulation including updating data to DarwinCore standards, unit conversions, and data flagging.
Microarraypipeline ⭐ 5
MAAPster is a comprehensive tool to perform transcriptome analysis of human or mouse Affymetrix gene expression data
Pairsqc ⭐ 5
QC report generator for Hi-C pairs file
Vlad ⭐ 5
Variable Life Adjusted Display and other risk-adjusted quality control charts
Baqcom ⭐ 5
Quality Control, Mapping and Reads Count for RNA-Seq Analysis
Metaqc ⭐ 5
MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis
Okmesonet ⭐ 5
R package to retrieve Oklahoma Mesonet climatological data
Msstatsqc ⭐ 5
A Bioconductor/R package for longitudinal system suitability monitoring and quality control for proteomic experiments
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