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9 search results found

Methylkit ⭐ 176

R package for DNA methylation analysis

R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing

Informme ⭐ 15

An information-theoretic pipeline for methylation analysis of WGBS data

Bayesian Clustering and Imputation of Single Cell Methylomes

Epigenomics_cwl ⭐ 7

SCREW: A Reproducible Workflow for Single-Cell Epigenomics

💹 The package is user friendly interface based on the cgdsr and other modeling packages to explore, compare, and analyse all available Cancer Data (Clinical data, Gene Mutation, Gene Methylation, Gene Expression, Protein Phosphorylation, Copy Number Alteration) hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).

Methylgsa ⭐ 5

A Bioconductor package and shiny app for DNA methylation data length bias adjustment in gene set testing

Bioinformatics_pipeline ⭐ 5

Bioinformatics Pipeline

Ehr_mrs_ucla ⭐ 5

A public repo to share methylation risk scores (MRS) derived from UCLA's electronic health records.

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