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Search results for python sra
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6 search results found
Pysradb
⭐
269
Package for fetching metadata and downloading data from SRA/ENA/GEO
Seq2science
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132
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
Grabseqs
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44
A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
Seqsender
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24
Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories
Tostadas
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10
🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission
Metadatatable
⭐
5
Work on and around an interactive metadata table for project identification
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