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Search results for python pathway analysis

pathway-analysis x

8 search results found

Altanalyze ⭐ 72

AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.

Reactomepy ⭐ 19

Explore biomolecular pathways in Reactome from the command-line or a Python script

Pathway Forte ⭐ 10

A Python package for benchmarking pathway database with functional enrichment and classification methods

Pygenprop ⭐ 9

A python library for programmatic usage of EBI InterPro Genome Properties.

Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)

VEGA: VAE Enhanced by Gene Annotations

Reactome2py ⭐ 5

python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.

Gea_community_detection ⭐ 5

Overrepresentation analysis for KEGG and PID pathways using community detection

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