Awesome Open Source

Programming Languages

Search results for python metagenomes

6 search results found

Pyrodigal ⭐ 111

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

Plasflow ⭐ 61

Software for prediction of plasmid sequences in metagenomic assemblies

Recycler ⭐ 41

This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33 by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir

Minimum Information about any (X) Sequence” (MIxS) specification

An algorithm for recovering haplotypes from metagenomes

Plasmidpicker ⭐ 5

Software to identify plasmid sequence data from metagenome using logistic regression and Minhash

FOCUS: An Agile Profiler for Metagenomic Data

Plasmidhunter ⭐ 5

This tool predicts plasmid sequences from genomic and metagenomic assemblies using machine learning.

Related Searches

Python Django (28,897)

Python Machine Learning (20,195)

Python Flask (17,643)

Python Dataset (14,792)

Python Docker (14,113)

Python Tensorflow (13,736)

Python Command Line (13,351)

Python Deep Learning (13,092)

Python Jupyter Notebook (12,976)

Python Network (11,495)

1-6 of 6 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.