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413 search results found

Monai ⭐ 5,010

AI Toolkit for Healthcare Imaging

Qasystemonmedicalkg ⭐ 4,527

A tutorial and implement of disease centered Medical knowledge graph and qa system based on it。知识图谱构建，自动问答，基于kg的自动问答。以疾病为中心的一定规模医药领域知识图谱，并以该知识

Huatuo Llama Med Chinese ⭐ 3,776

Repo for BenTsao [original name: HuaTuo (华驼)], Instruction-tuning Large Language Models with Chinese Medical Knowledge. 本草（原名：华驼）模型仓库，基于中文医学知识的大语言模型指令微调

Medicalgpt ⭐ 2,127

MedicalGPT: Training Your Own Medical GPT Model with ChatGPT Training Pipeline. 训练医疗大模型，实现了包括增量预训练、有监督微调、RLHF(奖励建模、强化学习训练)和DPO(直接偏

Torchio ⭐ 1,904

Medical imaging toolkit for deep learning

3dunetcnn ⭐ 1,750

Pytorch 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

Medicalnet ⭐ 1,648

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

Ssl4mis ⭐ 1,595

Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.

Deep Learning Toolkit for Medical Image Analysis

Mnssp3 ⭐ 1,272

Medicaldetectiontoolkit ⭐ 1,249

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

Niftynet ⭐ 1,170

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

Attention Gated Networks ⭐ 1,099

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

Unet Family ⭐ 1,029

Paper and implementation of UNet-related model.

Paperai ⭐ 1,023

📄 🤖 Semantic search and workflows for medical/scientific papers

Medmnist ⭐ 903

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Medicalzoopytorch ⭐ 896

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

A set of common support code for medical imaging, surgical navigation, and related purposes.

Medicaltorch ⭐ 724

A medical imaging framework for Pytorch

Xrayglm ⭐ 577

🩺 首个会看胸部X光片的中文多模态医学大模型 | The first Chinese Medical Multimodal Model that Chest Radiographs Summarization.

Invesalius3 ⭐ 553

3D medical imaging reconstruction software

Pytorch Medical Segmentation ⭐ 536

This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.

Medical image processing in Python

Innereye Deeplearning ⭐ 509

Medical Imaging Deep Learning library to train and deploy 3D segmentation models on Azure Machine Learning

Nndetection ⭐ 468

nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.

Med Chatglm ⭐ 462

Repo for Chinese Medical ChatGLM 基于中文医学知识的ChatGLM指令微调

Deepreg ⭐ 442

Medical image registration using deep learning

Bcdu Net ⭐ 435

BCDU-Net : Medical Image Segmentation

Vnet.pytorch ⭐ 421

A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation

Recurrent (conditional) generative adversarial networks for generating real-valued time series data.

Medical Concept Annotation Tool

A framework for high-performance medical image processing, neural network inference and visualization

Chinese Nlp Corpus ⭐ 378

Collections of Chinese NLP corpus

Insight ⭐ 366

INSIGHT is an autonomous AI that can do medical research!

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

Quickumls ⭐ 321

System for Medical Concept Extraction and Linking

Self Supervised Fewshot Medical Image Segmentation ⭐ 314

[ECCV'20] Self-supervision with Superpixels: Training Few-shot Medical Image Segmentation without Annotation (code&data-processing pipeline)

Brainstorm ⭐ 300

Implementation of "Data augmentation using learned transforms for one-shot medical image segmentation"

🏥 Medical Text Mining and Information Extraction with spaCy

Vertical Medical ⭐ 250

Open Source Healthcare System for Odoo

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

Ceal Medical Image Segmentation ⭐ 239

Active Deep Learning for Medical Imaging Segmentation

Doctor Friende ⭐ 237

Rasa-Doctor-Friende.A chinese medical chatbot based on Neo4j knowledge graph and Rasa.

Paperetl ⭐ 235

📄 ⚙️ ETL processes for medical and scientific papers

Medqa Chatglm ⭐ 235

🛰️ 基于真实医疗对话数据在ChatGLM上进行LoRA、P-Tuning V2、Freeze、RLHF等微调，我们的眼光不止于医疗问答

U2net_torch ⭐ 219

MICCAI2019:3D U$^2$-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation

Medicalnamedentityrecognition ⭐ 219

Medical Named Entity Recognition implement using bi-directional lstm and crf model with char embedding.CCKS2017中文电子病例命名实体识别项目,主要实现使用了基于字向量的四层双向

Graph-based Attention Model

Chineseblue ⭐ 212

Chinese Biomedical Language Understanding Evaluation benchmark (ChineseBLUE)

Deepehr ⭐ 193

Chronic Disease Prediction Using Medical Notes

Doctorai ⭐ 192

Repository for Doctor AI project

Ml From Scratch Seminar ⭐ 187

This repository is part of a "Machine Learning from Scratch" seminar at Harvard Medical School.

Python Mindwave ⭐ 187

Python scripts to interface with the Neurosky Mindwave EEG Headset

Character Bert ⭐ 186

Main repository for "CharacterBERT: Reconciling ELMo and BERT for Word-Level Open-Vocabulary Representations From Characters"

Multiplanarunet ⭐ 179

Multi-Planar UNet for autonomous segmentation of 3D medical images

Cnn 3d Images Tensorflow ⭐ 176

3D image classification using CNN (Convolutional Neural Network)

Embeddings ⭐ 175

Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"

Multi Scale Attention ⭐ 166

Code for our paper "Multi-scale Guided Attention for Medical Image Segmentation"

Generative adversarial network for generating electronic health records.

Medical Entity Recognition ⭐ 161

包含传统的基于统计模型(CRF)和基于深度学习(Embedding-Bi-LSTM-CRF)下的医疗

Grand Challenge.org ⭐ 156

A platform for end-to-end development of machine learning solutions in biomedical imaging

Ivadomed ⭐ 151

Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

Medsynthesisv1 ⭐ 147

This is a copy of package for medical image synthesis work with LRes-ResUnet and GAN (wgan-gp) in pytorch framework

Medical Dialogue System ⭐ 142

Vnet Tensorflow ⭐ 140

Implementation of vnet in tensorflow for medical image segmentation

Miccai Lits2017 ⭐ 137

liver segmentation using deep learning

Resunetplusplus ⭐ 135

Official code for ResUNetplusplus for medical image segmentation (TensorFlow & Pytorch implementation) (IEEE ISM)

Kaapana ⭐ 135

Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging.

Isic Archive Downloader ⭐ 133

A script to download the ISIC Archive of lesion images

Nasunet ⭐ 132

Self Supervised 3d Tasks ⭐ 131

best effort anonymization for medical images using python

Fuse Med Ml ⭐ 121

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

Atten_deep_mil ⭐ 117

Attention-based Deep MIL implementation and application

Active Contour Loss ⭐ 117

Implementation of active contour loss function

Medicaldataaugmentationtool ⭐ 114

RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanism

Covid Dialogue ⭐ 110

Sunsimiao ⭐ 110

🌿孙思邈中文医疗大模型(Sunsimiao)：提供安全、可靠、普惠的中文医疗大模型

Hyperdensenet ⭐ 106

This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.

Domain Generalization via Model-Agnostic Learning of Semantic Features

Medical_ner_crfsuite ⭐ 102

基于条件随机场的医疗电子病例的命名实体识别

Mritopng ⭐ 101

A simple python module to make it easy to batch convert DICOM files to PNG images.

Code of DDcGAN for infrared and visible image fusion and medical image fusion

Phiseg Code ⭐ 97

Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019

3d Ru Net ⭐ 94

A SlidingWindow-Free Accurate and Fast 3D Medical Image Segmentation Framework

Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.

Basic_unet_example ⭐ 93

An example project of how to use a U-Net for segmentation on medical images with PyTorch.

Depressionai ⭐ 92

Alexa skill for people suffering with depression.

Knowledgegraph_ner ⭐ 90

中文医学知识图谱命名实体识别，包括bi-LSTM+CRF，transformer+CRF等模型

Domain_specific_cl ⭐ 89

Code for NeurIPS 2020 article "Contrastive learning of global and local features for medical image segmentation with limited annotations"

medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis

Our regulatory documentation manager. Streamlines 62304, 14971, and 510(k) documentation for software projects.

MedType: Improving Medical Entity Linking with Semantic Type Prediction

Cnnbasedmedicalsegmentation ⭐ 83

Code for reproducing the results of our paper on CNN-based medical image segmentation

Medicalchatbot ⭐ 82

Medical-domain Dialogue System for Diseases Identification

Medtagger ⭐ 82

A collaborative framework for annotating medical datasets using crowdsourcing.

3d Medical Segmentation Gan ⭐ 81

3D Liver Segmentation with GAN

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