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13 search results found

🚂 Python API for Emma's Markov Model Algorithms 🚂

Advanced Multilanguage Interface to CVODES and IDAS

ARC - Automatic Rate Calculator

Modeling molecular ensembles with scalable data structures and parallel computing

Metabolic Engineering Workbench

The official PySCeS project source code repository.

StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks

A Python Framework for Modeling and Analysis of Signaling Systems

Pydhamed ⭐ 17

Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations

Patient-Specific Modeling in Python

Automatic-Differentiation-Enabled Plasma Transport

Multilayerpy ⭐ 7

A package to build, run and optimise a kinetic multi-layer model for aerosol particles and films

Rule-based modeling for whole-cell models.

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