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Search results for kinetic modeling
kinetic-modeling
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17 search results found
Pyemma
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292
🚂 Python API for Emma's Markov Model Algorithms 🚂
Amici
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105
Advanced Multilanguage Interface to CVODES and IDAS
Arc
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40
ARC - Automatic Rate Calculator
Enspara
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32
Modeling molecular ensembles with scalable data structures and parallel computing
Hyperpolarized Mri Toolbox
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31
The goal of this toolbox is to provide open-source research-level and prototyping software tools for hyperpolarized MRI experiments. It is currently based on MATLAB/Octave code, and includes code for designing radiofrequency (RF) pulses, imaging gradients, data reconstruction, and data analysis. doi: 10.5281/zenodo.1198915
Mewpy
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31
Metabolic Engineering Workbench
Pysces
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29
The official PySCeS project source code repository.
Stochpy
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28
StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks
Biomass
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23
A Python Framework for Modeling and Analysis of Signaling Systems
Pydhamed
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17
Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations
Pasmopy
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14
Patient-Specific Modeling in Python
Kineticlearning
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13
Learning Kinetic Models from Time Series Proteomics and Metabolomics Data
Adept
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8
Automatic-Differentiation-Enabled Plasma Transport
Multilayerpy
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7
A package to build, run and optimise a kinetic multi-layer model for aerosol particles and films
Gems3k
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6
Wc_rules
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6
Rule-based modeling for whole-cell models.
Gorilla
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5
GORILLA: Guiding-center ORbit Integration with Local Linearization Approach
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1-17 of 17 search results
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