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Search results for python image analysis

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144 search results found

Image Match ⭐ 2,915

🎇 Quickly search over billions of images

Pytorch Ssim ⭐ 1,741

pytorch structural similarity (SSIM) loss

Slicer ⭐ 1,339

Multi-platform, free open source software for visualization and image computing.

Fastdup ⭐ 1,313

fastdup is a powerful free tool designed to rapidly extract valuable insights from your image & video datasets. Assisting you to increase your dataset images & labels quality and reduce your data operations costs at an unparalleled scale.

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

Deep Learning Toolkit for Medical Image Analysis

Niftynet ⭐ 1,170

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

Medmnist ⭐ 903

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Slicergitsvnarchive ⭐ 883

Multi-platform, free open source software for visualization and image computing.

Cellprofiler ⭐ 833

An open-source application for biological image analysis

Simpleitk ⭐ 801

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

Cleanvision ⭐ 739

Automatically find issues in image datasets and practice data-centric computer vision.

Plantcv ⭐ 590

Plant phenotyping with image analysis

Itkwidgets ⭐ 571

An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.

Squidpy ⭐ 362

Spatial Single Cell Analysis in Python

Tools for computational pathology

Facetorch ⭐ 313

Python library for analysing faces using PyTorch

Image Quality ⭐ 312

Image quality is an open source software library for Image Quality Assessment (IQA).

Pyimsegm ⭐ 289

Image segmentation - general superpixel segmentation & center detection & region growing

Tiatoolbox ⭐ 277

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Python_for_image_processing_apeer ⭐ 263

https://www.youtube.com/playlist?list=PLHae9ggVvqP

Amazon Rekognition Video Analyzer ⭐ 254

A working prototype for capturing frames off of a live MJPEG video stream, identifying objects in near real-time using deep learning, and triggering actions based on an objects watch list.

Resnetcam Keras ⭐ 245

Keras implementation of a ResNet-CAM model

Porespy ⭐ 234

A set of tools for characterizing and analying 3D images of porous materials

Quantitative Image Analysis in C++, MATLAB and Python

Cellfinder ⭐ 170

Automated 3D cell detection in very large images

Ivadomed ⭐ 151

Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

Imago Forensics ⭐ 144

Imago is a python tool that extract digital evidences from images.

Py Image Dedup ⭐ 125

CLI utility to find near duplicate images and remove all but the best copy.

Cellprofiler Analyst ⭐ 115

Open-source software for exploring and analyzing large, high-dimensional image-derived data.

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

PixLab Resources & Code Samples

Mindboggle ⭐ 104

Automated anatomical brain label/shape analysis software (+ website)

Siftimagesimilarity ⭐ 100

Interactive code for image similarity using SIFT algorithm

Image_space ⭐ 91

Interactive Image similarity and Visual Search and Retrieval application

Mediathread ⭐ 84

Django application for multimedia annotations facilitating collaboration on video and image analysis. Developed at the Columbia University Center for Teaching and Learning.

Crc4docker ⭐ 82

Python scripts for the textbook "Image Analysis, Classification and Change Detection in Remote Sensing, Fourth Revised Edition"

Niworkflows ⭐ 81

Common workflows for MRI (anatomical, functional, diffusion, etc)

Processing Library and Analysis Toolkit for Medical Imaging in Python

Hyperspectral_image_analysis_simplified ⭐ 77

The repository contains the implementation of different machine learning techniques such as classification and clustering on Hyperspectral and Satellite Imagery.

Python Bioimage Analysis Tutorial ⭐ 72

A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.

Clustimage ⭐ 71

clustimage is a python package for unsupervised clustering of images.

Spm Image ⭐ 68

Sparse modeling and Compressive sensing in Python

PriMIA: Privacy-preserving Medical Image Analysis

Douglas Quaid ⭐ 59

Open source software for image correlation, distance and analysis

Itkpythonpackage ⭐ 59

A setup script to generate ITK Python Wheels

Ark Analysis ⭐ 57

Integrated pipeline for multiplexed image analysis

Deeposlandia ⭐ 55

Image analysis with deep learning and neural networks

Open Ucn ⭐ 52

Fully convolutional metric learning for geometric image correspondences.

Itksphinxexamples ⭐ 50

Cookbook examples for the Insight Toolkit documented with Sphinx

Ida Images ⭐ 50

Image preview plugin for IDA disassembler.

Fractoolbox ⭐ 48

Python tools for structural geology and borehole image analysis which includes data handling, frequency and geometric analysis, and reservoir geomechanics.

pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis

An AI-powered open-source medical image analysis toolbox

Spatial Single-Cell Analysis Toolkit

hyperspectral galaxy modeling and deblending

Kspace Explorer ⭐ 45

⚕️ An educational tool to visualise k-space and aid the understanding of MRI image generation

Digital Pathology Whole Slide Image Analysis Toolbox

Utils and convenience functions for large-scale bio-image analysis.

A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.

GARI (Genetic Algorithm for Reproducing Images) reproduces a single image using Genetic Algorithm (GA) by evolving pixel values.

C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.

Slicercustomapptemplate ⭐ 38

Template to be used as a starting point for creating a custom 3D Slicer application

Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.

2018 05 30 Krscourseinbiomedicalimageanalysisandvisualization ⭐ 35

Kitware Course in Biomedical Image Analysis and Visualization: ITK

A flexible Python platform for Regularized Maximum Likelihood imaging

Orange3 Imageanalytics ⭐ 32

🍊 🎑 Orange3 add-on for dealing with image related tasks

Pic Numero ⭐ 30

Project exploring counting objects in images using image analysis and machine learning.

Cluster_tools ⭐ 30

Distributed segmentation for bio-image-analysis

Cython bindings for fpzip, a floating point image compression algorithm.

Speed up coding/extending image analysis in Python.

Ms D_net_pytorch ⭐ 28

PyTorch implementation of Mixed-Scale Dense Convolutional Neural Network (MS-D Net) for Image Analysis

Sdcflows ⭐ 27

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes

Deforestation ⭐ 25

A machine learning exercise, using KNN to classify deforested areas

Lattice light-sheet post-processing utility.

Pyclesperanto ⭐ 21

GPU-accelerated Image Processing library using OpenCL

Ancis Pytorch ⭐ 20

[Medical Image Analysis 2019] Attentive Neural Cell Instance Segmentation

Shinyhunter ⭐ 20

A minimal Pokémon shiny hunter app built with Python for the GB Operator.

This repository contains python implementations on Low-rank-plus-sparse, Atlas-to-image Registration (pyLAR) framework and its applications in medical image analysis and computer vision.

Phasepack ⭐ 20

Python ports of some of Peter Kovesi's MATLAB functions for image analysis using local phase information

Video To Image ⭐ 19

Convert video to an image sequence with per frame blur detection.

Cellfinder Core ⭐ 19

Standalone cellfinder cell detection algorithm

🔬🍸 Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ

Malware_classification ⭐ 17

Transfer Learning for Image-Based Malware Classification

Scikit Image Processing ⭐ 17

Image processing examples with Numpy, Scipy, and Scikit-image

Capillarydetection ⭐ 16

HDMIA: An Architect for High Demand Medical Image Analysis using Deep Learning

Pythonforaivia ⭐ 15

Python scripts library for Aivia. Ask your questions on the forum >>

Depth Estimation Plane Detection ⭐ 15

Course assignment for Image Analysis and Understanding 2017

Obia4rtm ⭐ 15

Object-Based Image Analysis Tools for Radiative Transfer Modeling

Amfinder ⭐ 14

The Automatic Mycorrhiza Finder (AMFinder) allows for automatic computer vision-based identification and quantification of AM fungal colonisation and intraradical hyphal structures on ink-stained root images using convolutional neural networks.

Miadeepssl ⭐ 14

This page is for A Survey on Deep Learning of Small Sample in Biomedical Image Analysis.

Object based tracking for model, radar and any other kind of data

Histoclean ⭐ 13

HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.

Tt_tracker ⭐ 13

Tracking a table tennis ball in 3d using two cameras, and analyzing the result.

Opendrop ⭐ 13

OpenDrop pendant drop tensiometry software

Image Analysis In Python ⭐ 13

Materials for a 90 minute workshop "Image Analysis in Python".

O-MedAL: Online Active Deep Learning for Medical Image Analysis. This repo contains code for the paper.

Py Droplets ⭐ 12

Python package for analyzing and representing droplets and emulsions

Galaxy Image Analysis ⭐ 12

Galaxy tools for image analysis

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