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Search results for python hdf5

54 search results found

Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python, ML, visualization and exploration of big tabular data at a billion rows per second 🚀

Visidata ⭐ 7,193

A terminal spreadsheet multitool for discovering and arranging data

Pyscada ⭐ 421

PyScada is a open source scada system that uses the Django framework as backend

pyiron - an integrated development environment (IDE) for computational materials science.

GDL - GNU Data Language

Deepdish ⭐ 228

Flexible HDF5 saving/loading and other data science tools from the University of Chicago

Awkward 0.x ⭐ 218

Manipulate arrays of complex data structures as easily as Numpy.

A pythonic interface for the ROOT libraries on top of the PyROOT bindings.

A cool place to store your Hi-C

Conduit ⭐ 176

Simplified Data Exchange for HPC Simulations

H5netcdf ⭐ 173

Pythonic interface to netCDF4 via h5py

A Python API for working with Neurodata stored in the NWB Format

Argos: a data viewer that can read HDF5, NetCDF4, and other file formats.

Weather forecasting display and analysis package developed by NWS/Raytheon, released as open source software by Unidata.

Openpmd Api ⭐ 126

💾 C++ & Python API for Scientific I/O

Cloud-native, service based access to HDF data

Training Material ⭐ 114

A collection of code examples as well as presentations for training purposes

Geophysical Bayesian Inference in Python. Docs:

Tftables ⭐ 68

HDF5 interface for Tensorflow.

Readgssi ⭐ 63

python tool to read and plot Geophysical Survey Systems Incorporated (GSSI) radar data

Hdf5 Json ⭐ 62

Specification and tools for representing HDF5 in JSON

Flowtorch ⭐ 54

flowTorch - a Python library for analysis and reduced-order modeling of fluid flows

Jupyterlab H5web ⭐ 53

A JupyterLab extension to explore and visualize HDF5 file contents. Based on https://github.com/silx-kit/h5web.

H5record ⭐ 43

Large dataset storage format for Pytorch

The Hierarchical Data Modeling Framework

Pandas To Postgres ⭐ 33

Copy Pandas DataFrames and HDF5 files to PostgreSQL database

A Python package for CGNS

A post-processing engine for particle simulations

Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.

collection of utilities to use with deep learning libraries (e.g. caffe)

Framework for storing, visualizing, and processing Universal Spectroscopic and Imaging Data (USID)

Hdf5 Udf ⭐ 20

User-Defined Functions for HDF5

Nwb_hackathons ⭐ 19

Repository for collecting materials from nwb hackathons

Deepicedrain ⭐ 19

Mapping and monitoring deep subglacial water activity in Antarctica using remote sensing and machine learning, with ICESat-2!

Discretisedfield ⭐ 16

Python package for the analysis and visualisation of finite-difference fields.

Acquire RAW Bayer-masked images with Raspberry Pi camera (before demosaicking) in Python

Library of PH5 clients, apis, and utilities

Hdf5widget ⭐ 15

This is hdf5widget, a widget for viewing the contents of a HDF5-file in Jupyter Notebooks using ipywidgets.

Swiftsimio ⭐ 13

Python library for reading SWIFT data. Uses unyt and h5py.

Tensorflowcnnfromtrainingtotesting ⭐ 13

This is a very Simple example of showing how to build image dataset from your own collection of images, how to train multiple class classifier using tensorflow CNN and how to predict the class of an object in an unseen image. This code is designed so that a newbie user become able to train a tensorflow CNN model using his limited CPU resources. By loading small batches of images in the HDF5 data format is the key for doing so.

DICOM Extraction for Large-scale Image Analysis (DELIA).

Scientific Python ⭐ 12

Repository for participants of the "Scientific Python" training

Hdf5view ⭐ 11

Simple Qt/Python based viewer for HDF5 files

Geoguide ⭐ 10

🌐 An interactive guidance approach for spatial data

Lazyhdf5 ⭐ 10

Making H5py easier (command line and pyqt5 tools)

Threedigrid ⭐ 9

grid administration for 3Di models

Iebe Music ⭐ 9

This is a repository is an overarching numerical framework for event-by-event simulations of relativistic heavy-ion collisions

Multitables ⭐ 9

High performance parallel reading of HDF5 files using PyTables, multiprocessing, and shared memory.

Typed Dfs ⭐ 8

Make Pandas DataFrames enforce definitions, self-organize, and correctly serialize in 18 formats.

Longsword Stance Restful Service ⭐ 7

Longsword Stance RESTful Service Working demo: https://www.youtube.com/watch?v=v7hvOyPQ0EM Longsword Stance RESTful Service: Invokes prediction results with real-time multivariate time series data. Using Flask and python, the pre-trained bidirectional LSTM deep learning model is loaded to memory. RESTful post request containing real-time rows of IMU data can be used to classify the longsword movement stance. Information on the classification confidence and execution time in milliseconds is also

A radar viewer written in Python

Read and write H5MD files

h5grove is a Python package that provides utilities to design backends serving HDF5 file content: attributes, metadata and data.

H5rdmtoolbox ⭐ 5

Supporting a FAIR Research Data lifecycle using Python and HDF5.

Python Utilities for NeXus HDF5 files

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