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Search results for hdf5

131 search results found

Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python, ML, visualization and exploration of big tabular data at a billion rows per second 🚀

Visidata ⭐ 7,193

A terminal spreadsheet multitool for discovering and arranging data

Pyscada ⭐ 421

PyScada is a open source scada system that uses the Django framework as backend

Trade Frame ⭐ 369

C++ 17 based library (with sample applications) for testing equities, futures, etfs & options based automated trading ideas using DTN IQFeed real time data feed and Interactive Brokers (IB TWS API) for trade execution. Some support for Alpaca & Phemex. Notifications via Telegram [irc: Libra #tradeframe ]

Hdf5.jl ⭐ 369

Save and load data in the HDF5 file format from Julia

pyiron - an integrated development environment (IDE) for computational materials science.

MATLAB MAT File I/O Library

Jsonlab ⭐ 290

JSONLab: compact, portable, robust JSON/binary-JSON encoder/decoder for MATLAB/Octave

Hdf5 Rust ⭐ 279

GDL - GNU Data Language

Next generation of ADIOS developed in the Exascale Computing Program

Oneflow ⭐ 237

LargeScale Multiphysics Scientific Simulation Environment-OneFLOW CFD

Setup a new machine without sudo!

Deepdish ⭐ 228

Flexible HDF5 saving/loading and other data science tools from the University of Chicago

Awkward 0.x ⭐ 218

Manipulate arrays of complex data structures as easily as Numpy.

The CFD General Notation System (CGNS) provides a standard for recording and recovering computer data associated with the numerical solution of fluid dynamics equations. All development work and bug fixes should be based off the 'develop' branch, CGNS uses the branching model Gitflow.

Mesh_tools ⭐ 196

A pythonic interface for the ROOT libraries on top of the PyROOT bindings.

A cool place to store your Hi-C

Conduit ⭐ 176

Simplified Data Exchange for HPC Simulations

H5netcdf ⭐ 173

Pythonic interface to netCDF4 via h5py

A Python API for working with Neurodata stored in the NWB Format

netCDF Operators

Argos: a data viewer that can read HDF5, NetCDF4, and other file formats.

Weather forecasting display and analysis package developed by NWS/Raytheon, released as open source software by Unidata.

React components for data visualization and exploration

Netcdf Java ⭐ 128

The Unidata netcdf-java library

Openpmd Api ⭐ 126

💾 C++ & Python API for Scientific I/O

Cloud-native, service based access to HDF data

Training Material ⭐ 114

A collection of code examples as well as presentations for training purposes

Jupyterlab Hdf5 ⭐ 113

Open and explore HDF5 files in JupyterLab. Can handle very large (TB) sized files, and datasets of any dimensionality

C++17 templates between [stl::vector | armadillo | eigen3 | ublas | blitz++] and HDF5 datasets

C++ wrapper for the HDF5 C-library

A pure Java HDF5 library

H5fortran ⭐ 89

Lightweight HDF5 polymorphic Fortran: h5write() h5read()

A C++17 interface for HDF5

A pure javascript HDF5 reader

Geophysical Bayesian Inference in Python. Docs:

Scibasic ⭐ 74

sciBASIC# is a kind of dialect language which is derive from the native VB.NET language, and written for the data scientist.

A WebAssembly HDF5 reader/writer library

Xtensor Io ⭐ 70

xtensor plugin to read and write images, audio files, numpy (compressed) npz and HDF5

Curatedatlasqueryr ⭐ 70

Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.

Tftables ⭐ 68

HDF5 interface for Tensorflow.

HDF5 for iOS and OS X

Externdata ⭐ 63

📄 Modelica library for data I/O of CSV, INI, JSON, MATLAB MAT, SSV, TIR, Excel XLS/XLSX and XML files

Readgssi ⭐ 63

python tool to read and plot Geophysical Survey Systems Incorporated (GSSI) radar data

Hdf5 Json ⭐ 62

Specification and tools for representing HDF5 in JSON

Package providing an interface between HDF5 and R

Flowtorch ⭐ 54

flowTorch - a Python library for analysis and reduced-order modeling of fluid flows

Public EMsoft repository

Jupyterlab H5web ⭐ 53

A JupyterLab extension to explore and visualize HDF5 file contents. Based on https://github.com/silx-kit/h5web.

Ramsesgpu ⭐ 50

Astrophysics MHD simulation code optimized for large cluster of GPU

Dolphindbplugin ⭐ 47

Matio Cpp ⭐ 45

A C++ wrapper of the matio library, with memory ownership handling, to read and write .mat files.

H5record ⭐ 43

Large dataset storage format for Pytorch

A registered ZFP compression plugin for HDF5

The Hierarchical Data Modeling Framework

🐕 Concurrent HDF5 and NetCDF4 reader (experimental)

Recorder ⭐ 40

Multi-level I/O tracing library

An R-based interface for loom files

Pointcloudengine ⭐ 34

Point Cloud Rendering Engine with Octree Generation, Splat Blending, Phong Lighting and Neural Network Evaluation

Pandas To Postgres ⭐ 33

Copy Pandas DataFrames and HDF5 files to PostgreSQL database

A Python package for CGNS

A post-processing engine for particle simulations

Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.

Vbz_compression ⭐ 26

VBZ compression plugin for nanopore signal data

collection of utilities to use with deep learning libraries (e.g. caffe)

A benchmark suite for measuring HDF5 performance.

Framework for storing, visualizing, and processing Universal Spectroscopic and Imaging Data (USID)

Go Native Netcdf ⭐ 23

A native Go implementation of NetCDF4.

Woss Ns3 ⭐ 23

WOSS is a framework that permits the integration of any underwater channel simulator that expects environmental data and provides a channel realization. WOSS integrates the Bellhop ray-tracing program. Thanks to its automation the user only has to specify the location in the world and the time where the simulation should take place.

R# language is a kind of R liked vectorized language implements on .NET environment for the bioinformatics data analysis

Vscode H5web ⭐ 21

VSCode extension to explore and visualize HDF5 files

Hdf5 Udf ⭐ 20

User-Defined Functions for HDF5

Nwb_hackathons ⭐ 19

Repository for collecting materials from nwb hackathons

Deepicedrain ⭐ 19

Mapping and monitoring deep subglacial water activity in Antarctica using remote sensing and machine learning, with ICESat-2!

Vol Async ⭐ 18

Asynchronous I/O for HDF5

XDMF parallel partitioned mesh I/O on top of HDF5

H5fortran Mpi ⭐ 17

HDF5-MPI parallel Fortran object-oriented interface

Acquire RAW Bayer-masked images with Raspberry Pi camera (before demosaicking) in Python

Discretisedfield ⭐ 16

Python package for the analysis and visualisation of finite-difference fields.

D wrappers for HDF5 - aiming ultimately at idiomatic D style. thanks to Fritjers

Hdf5_utils ⭐ 16

my own Fortran high level interface for HDF5

Library of PH5 clients, apis, and utilities

Hdf5widget ⭐ 15

This is hdf5widget, a widget for viewing the contents of a HDF5-file in Jupyter Notebooks using ipywidgets.

Serving Runtime ⭐ 14

Exposes a serialized machine learning model through a HTTP API.

Community Codec Repository

Spikenet ⭐ 13

A computational platform for studying spiking neural circuits developed by Dr. Pulin Gong's group at University of Sydney.

A set of tools to organize, archive and distribute data files.

Swiftsimio ⭐ 13

Python library for reading SWIFT data. Uses unyt and h5py.

Tensorflowcnnfromtrainingtotesting ⭐ 13

This is a very Simple example of showing how to build image dataset from your own collection of images, how to train multiple class classifier using tensorflow CNN and how to predict the class of an object in an unseen image. This code is designed so that a newbie user become able to train a tensorflow CNN model using his limited CPU resources. By loading small batches of images in the HDF5 data format is the key for doing so.

Performance Benchmark of E3SM's I/O Kernel

DICOM Extraction for Large-scale Image Analysis (DELIA).

A library for converting between kdb+ and HDF5 data

Nrgplusplus ⭐ 12

A c++ library for Numerical renormalization group (NRG)

KEALib provides an implementation of the GDAL data model. The format supports raster attribute tables, image pyramids, meta-data and in-built statistics while also handling very large files and compression throughout.

Scientific Python ⭐ 12

Repository for participants of the "Scientific Python" training

Antaresread ⭐ 11

Import, manipulate and explore the results of an Antares simulation

Hdf5view ⭐ 11

Simple Qt/Python based viewer for HDF5 files

1-100 of 131 search results

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