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Search results for python genomics visualization

genomics-visualization x

20 search results found

Pycirclize ⭐ 476

Circular visualization in Python (Circos Plot, Chord Diagram)

Pygenomeviz ⭐ 177

A genome visualization python package for comparative genomics

Igv Snapshot Automator ⭐ 122

Script to automatically create and run IGV snapshot batchscripts

Trackhub ⭐ 47

create, manage, and upload track hubs for use in the UCSC genome browser

GenoVi, an automated customizable circular genome visualizer for bacteria and archaea

Interactive software tool for the assignment of cell types in single-cell studies.

Ezancestry ⭐ 28

Easy genetic ancestry predictions in Python

Jbrowse Jupyter ⭐ 21

A python package for showing JBrowse views

Mgcplotter ⭐ 20

Microbial Genome Circular plotting tool for comparative genomics using Circos

Edgecase ⭐ 13

A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.

Application for semi-automated genomic annotation.

Plot_genome_align_fig ⭐ 10

Plot genome alignment figure using progressiveMauve & genoPlotR

Gene Hints ⭐ 8

Discoverability for gene search 🧬 🔍

SCGV is an interactive graphical tool for single-cell genomics data, with emphasis on single-cell genomics of cancer

Command line tool to plot genomic coverage from a BAM file

Glue Genes ⭐ 7

glue for genomics and transcriptomics

Easy-to-use web application for visualization and comparison of genomes in Genbank file

Canvasxpress Js ⭐ 6

CanvasXpress: A JavaScript Library for Data Analytics with Full Audit Trail Capabilities.

1000 Genomes Project population visualizations using dimensionality reduction

Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)

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