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fluorescence-microscopy-imaging x

12 search results found

Tools for computational pathology

Zetastitcher ⭐ 29

ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.

Point Spread Function calculations for fluorescence microscopy. Forked from https://pypi.org/project/psf

Sparse Deconv Py ⭐ 24

Official Python implementation of the 'Sparse deconvolution'-v0.3.0

Self-Supervised Vision Transformers for multiplexed imaging datasets

File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy - For active develeopment visit gitlab.peulen.xyz

PyFRAP: A Python based FRAP analysis tool box

Colicoords ⭐ 12

Single-cell fluorescence microscopy data analysis

Ipcf.ipynb ⭐ 10

Tutorial on pair correlation function analysis of fluorescence fluctuations in big image time series

An open-source Python library for the analysis of fluorescence lifetime and hyperspectral images using the phasor approach

RNA smFISH oligos/probes design tool

Read Becker & Hickl SDT files. Forked from https://pypi.org/project/sdtfile

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