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Search results for fluorescence microscopy imaging

fluorescence-microscopy-imaging x

20 search results found

Tools for computational pathology

Sparse Sim ⭐ 45

Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3

Precision current source, with optional optical feedback, for driving LEDs and laser diodes

Zetastitcher ⭐ 29

ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.

Point Spread Function calculations for fluorescence microscopy. Forked from https://pypi.org/project/psf

Threedeconv.jl ⭐ 25

A convex 3D deconvolution algorithm for low photon count fluorescence imaging

Sparse Deconv Py ⭐ 24

Official Python implementation of the 'Sparse deconvolution'-v0.3.0

Self-Supervised Vision Transformers for multiplexed imaging datasets

File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy - For active develeopment visit gitlab.peulen.xyz

PyFRAP: A Python based FRAP analysis tool box

Colicoords ⭐ 12

Single-cell fluorescence microscopy data analysis

Ipcf.ipynb ⭐ 10

Tutorial on pair correlation function analysis of fluorescence fluctuations in big image time series

Ddrs4pals ⭐ 9

DDRS4PALS - A software for the acquisition and simulation of positron lifetime spectra (PALS) using the DRS4 evaluation board.

An open-source Python library for the analysis of fluorescence lifetime and hyperspectral images using the phasor approach

An ImageJ plugin to quantify ciliary shape, length, and fluorescence.

Single Layer 3d Tfm ⭐ 6

Repository for single-layer 3D TFM for measuring cellular displacements and tractions with epifluorescence microscopy

RNA smFISH oligos/probes design tool

Quantify Intensity From Timelapse ⭐ 6

Step-by-step instruction to quantify fluorescence intensities from timelapse imaging experiments

Read Becker & Hickl SDT files. Forked from https://pypi.org/project/sdtfile

Qab Pnp Admm Deconvolution ⭐ 5

Plug-and-Play ADMM scheme based on an adaptive denoiser using the Schroedinger equation's solutions of quantum physics.

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