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Search results for python biomedical informatics
biomedical-informatics
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python
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9 search results found
Kg_rag
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114
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Pymetamap
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103
Python wraper for MetaMap
Metasra Pipeline
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42
MetaSRA: normalized sample-specific metadata for the Sequence Read Archive
Cando
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29
Computational Analysis of Novel Drug Opportunities
Multi Label Zero Shot
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22
Few- and Zero-shot Multi-Label Learning for Structured Label Spaces
Clinical_informatics_umls
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22
An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being a free UMLS license holder. This repo will subset 2021AB UMLS native release, introduce/build upon UMLS provided tools to load a configured subset into first a relational database --> MySQL, SQLite, PostgreSQL and MariaDB all covered within this repo. Next the UMLS subset which is stored in a relational DB will be queried, modeled and lastly loaded into a defi
Schematic
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19
Package for biomedical data model and metadata ingress management
Meddistant19
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8
MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)
Omim
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6
Data ingest pipeline for OMIM.
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