Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for biomedical informatics
biomedical-informatics
x
22 search results found
Mne Cpp
⭐
143
MNE-CPP: A Framework for Electrophysiology
Kg_rag
⭐
114
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
Pymetamap
⭐
103
Python wraper for MetaMap
Duo
⭐
48
Ontology for consent codes and data use requirements
Metasra Pipeline
⭐
42
MetaSRA: normalized sample-specific metadata for the Sequence Read Archive
Cando
⭐
29
Computational Analysis of Novel Drug Opportunities
Clinical_informatics_umls
⭐
22
An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being a free UMLS license holder. This repo will subset 2021AB UMLS native release, introduce/build upon UMLS provided tools to load a configured subset into first a relational database --> MySQL, SQLite, PostgreSQL and MariaDB all covered within this repo. Next the UMLS subset which is stored in a relational DB will be queried, modeled and lastly loaded into a defi
Multi Label Zero Shot
⭐
22
Few- and Zero-shot Multi-Label Learning for Structured Label Spaces
Schematic
⭐
19
Package for biomedical data model and metadata ingress management
Biomedicus
⭐
14
BioMedICUS: A biomedical and clinical NLP engine.
Cedar Project
⭐
12
Build project for all CEDAR Java repositories
Etude Engine
⭐
11
ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a range of annotation schemata and corpus formats
Cream
⭐
9
CREAM (Clustering of Functional Regions Analysis Method) is a new method for identification of clusters of functional regions (COREs) within chromosomes.
Convert Pheno
⭐
8
A software toolkit for the interconversion of standard data models for phenotypic data
Emory Bmi Gsoc
⭐
8
Emory BMI GSoC 2020 Project Ideas
Meddistant19
⭐
8
MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)
River
⭐
7
R package for RIVER (RNA-Informed Variant Effect on Regulation)
Meta
⭐
7
📎 About MIDA Project
Transmart Core
⭐
6
Core components and documentation of the tranSMART platform.
Ehrtemporalvariability
⭐
6
R package for delineating temporal dataset shifts in Eletronic Health Records
Omim
⭐
6
Data ingest pipeline for OMIM.
Xtens App
⭐
5
A digital repository for biomedical data based on a flexible JSON data model ( The project has been moved to a new address https://github.com/xtens-suite/xtens-app.git )
1-22 of 22 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.