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Search results for python bacterial genomes

bacterial-genomes x

8 search results found

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

Strainscan ⭐ 30

High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers

Stringmlst ⭐ 27

Fast k-mer based tool for multi locus sequence typing (MLST)

Scaffold_builder ⭐ 12

Combining de novo and reference-guided assembly with Scaffold_builder

Tool intended to pull out sequences and annotations between insertion sites specified by the user.

📜 the Great Automatic Nomenclator — The Next Million Names for Archaea and Bacteria

Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)

cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.

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