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Search results for python 3d slicer extension

3d-slicer-extension x

45 search results found

Monailabel ⭐ 496

MONAI Label is an intelligent open source image labeling and learning tool.

Slicerjupyter ⭐ 179

Extension for 3D Slicer that allows the application to be used from Jupyter notebook

Slicerheart ⭐ 89

3D Slicer extension for cardiac analysis

Slicermorph ⭐ 74

Extension to import microCT data and conduct 3D morphometrics in Slicer

Slicerlungctanalyzer ⭐ 57

This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.

Slicerautomateddentaltools ⭐ 57

A 3D Slicer extension to use AMASSS, ALI-CBCT and ALI-IOS

Extensionsindex ⭐ 52

Slicer extensions index

Slicerelastix ⭐ 34

This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.

Slicertomosam ⭐ 30

An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging techniques.

Slicerrvxliversegmentation ⭐ 24

3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X

Slicersegmenteditorextraeffects ⭐ 24

Many additional segmentation tools for 3D Slicer's Segment Editor

Slicerpytorch ⭐ 23

This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.

Slicerdentalmodelseg ⭐ 21

This extension aims to provide a GUI for a deep-learning automated teeth segmentation tool that we developed at the University of North Carolina in Chapel Hill.

Slicertorchio ⭐ 19

3D Slicer module for TorchIO.

Slicer Surfacewrapsolidify ⭐ 19

3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation

Segmentationreview ⭐ 18

Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor funtionality. Created to speed up the validation process done by a clinician - the dataset loads in one batch with no need to load masks and volumes separately.

Slicerbonereconstructionplanner ⭐ 18

3D Slicer module for planning mandible reconstruction surgery using fibula flap

Slicermonaiviz ⭐ 16

MONAIViz - 3D Slicer Extension

Collageradiomics ⭐ 14

Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subtle anisotropic differences in disease pathologies by measuring entropy of co-occurrences of voxel-level gradient orientations on imaging computed within a local neighborhood.

Tciabrowser ⭐ 14

3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).

Slicernetstim ⭐ 13

Collection of 3D Slicer modules mainly focused on deep brain stimulation applications.

Sliceropenanatomy ⭐ 12

3D Slicer extension for exporting Slicer scenes to use in the OpenAnatomy.org browser

Slicerneurosegmentation ⭐ 10

NeuroSegmentation extension for 3D Slicer

Mpreview ⭐ 10

3D Slicer extension for streamlined annotation of images

Slicerdebuggingtools ⭐ 9

Extension for 3D Slicer containing various tools for module development and debugging

Slicetracker ⭐ 9

SliceTracker is a 3D Slicer extension to support the workflow of MR-guided prostate biopsies.

Slicer extension for ultrasound-guided breast tumor resection (lumpectomy)

Cranio-Maxillofacial registration

Slicercaseiterator ⭐ 8

Simple Scripted Module to batch process patients in 3D Slicer

Slicer Abltemporalbonesegmentation ⭐ 8

3D Slicer extension featuring spacing resampling, fiducial registration, and rigid registration of temporal bone images.

Segmentregistration ⭐ 7

3D Slicer extension for segment registration (aka fusion, contour propagation)

Slicerastmphantomtest ⭐ 7

This software is a module for 3D Slicer to perform the accuracy test of a tracking system as described in the ASTM standard F2554.

Bonetextureextension ⭐ 7

Slicer extensions for computing feature maps of N-Dimensional images using well-known texture analysis methods.

Slicerablationplanner ⭐ 6

Ablation Planner

Shapevariationanalyzer ⭐ 6

Shape modeling and classification, extract shape features

Osteotomyplanner ⭐ 6

Slicerlanguagepacks ⭐ 6

3D Slicer extension for creating, editing, and storing translations for Slicer core and extensions

Filmdosimetryanalysis ⭐ 6

3D Slicer extension containing a slicelet called Film Dosimetry Analysis. It is a 2D dosimetry tool used in commissioning new radiation techniques and to validate the accuracy of radiation treatment by enabling visual comparison of the planned dose to the delivered dose

Slicerdevelopertoolsforextensions ⭐ 6

Set of tools to help developers when creating new Slicer extensions

Slicercbm ⭐ 5

Computational Biophysics for Medicine in 3D Slicer

Slicerstereotaxia ⭐ 5

Slicer stereotatic frame 3D coordinates calculus.-

Slicer Bonethicknessmapping ⭐ 5

3D Slicer module that creates a gradient map representing the bone thickness of a volume using VTK ray-casting.

Slicerdiffusionqc ⭐ 5

Quality checking of DWMRI

Slicerbiomech ⭐ 5

Extension for the collection and analysis of biomechanical data from 3D specimen data

Slicermrunner ⭐ 5

Beta Version. Browse and run all mhub models directly within 3D Slicer.

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