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Search results for protein molecule
molecule
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protein
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33 search results found
Molecularnodes
⭐
729
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Equibind
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321
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
Moleculekit
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183
MoleculeKit: Your favorite molecule manipulation kit
Mol Instructions
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116
Mol-Instructions is a Large-Scale Biomolecules Instruction Dataset for Large Language Models.
Beautiful Atoms
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102
Python module for drawing and rendering beautiful atoms and molecules using Blender.
Bioblender
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98
AddOn for Blender to do molecular work
Chatdrug
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96
LLM for Drug Editing, ICLR 2024
Atomium
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92
Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)
Singlecellseq
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79
Batch effects and the effective design of single-cell gene expression studies
Protein Science
⭐
76
A collection of useful tutorials for Protein Science
Geom3d
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75
Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023
Opencadd
⭐
70
A Python library for structural cheminformatics
2019 Ncov
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68
Efforts towards proposing a potentially highly active molecule against a target protein of the 2019 Novel Coronavirus
Awesome Deep Learning 4 Life Sciences
⭐
65
A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).
The Databases For Drug Discovery
⭐
59
The Databases for Drug Discovery (DDD)
Vscoding Sequence
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56
VSCode Extension for interactively visualising protein structure data in the editor
Deepchem Gui
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53
A simple web GUI for DeepChem
Gym Lattice
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52
An HP 2D Lattice Environment with a Gym-like API for the Protein Folding Problem
Bioblender21
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47
Blender plugin to process biological data and molecular work.
Rxdock
⭐
43
RxDock is a fork of rDock. Note: the latest code is under development. Please do git checkout patched-rdock after clone if you want patched rDock. [IMPORTANT NOTE: pull requests should be posted on GitLab, this is a read-only source code mirror]
Smina Docking Benchmark
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40
Rcpi
⭐
28
Molecular informatics toolkit with a comprehensive integration of bioinformatics and cheminformatics tools for drug discovery.
Hotspots
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27
A knowledge-based method for determining small molecule binding "hotspots".
Glycosylator
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23
Framework for the rapid modeling glycans and glycoproteins.
Imvs
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11
A simple protein molecular visualisation app implementing with Apple Swift for iOS. Provides balls and balls & sticks display mode in CPK colours.
Pose
⭐
10
A bare metal Python library for building and manipulating protein molecular structures
Visbol Js
⭐
9
SBOLv rendering in JavaScript
Vxafee
⭐
9
An open source personalized peptide vaccine design against the Wuhan Coronavirus 2019-nCoV.
Prodigy Lig
⭐
8
Prediction of Protein-Small molecule binding affinities
Mro
⭐
8
The MHC Restriction Ontology
Mastic
⭐
8
Multi-Atom Structure/Selection Toolkit with Interaction Capabilities
Abchemoinformatics
⭐
7
🆎 ABC of chemoinformatics
Smiles Neural Network
⭐
7
A neural network for predicting properties of molecules based on their SMILES representation
Predictive Protein Classification Naive Bayes Classifier
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6
Bearlyunderstanding
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6
ML based prediction of immunogenic neoantigens for immunotherapy
Sm_assemblies
⭐
6
Analysis of protein coding exons in single molecule assemblies
Pywater
⭐
6
Biographs
⭐
5
Python class to easily deal with protein networks.
Pymove
⭐
5
Library and utilities for training volume estimation models with PyMoVE.
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1-33 of 33 search results
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