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16 search results found

A Go package for engineering organisms.

Find_differential_primers ⭐ 54

Code for design of diagnostic PCR primers, and metabarcoding markers.

Primerserver2 ⭐ 47

PrimerServer2: a high-throughput primer design and specificity-checking platform

In-silico PCR, primer design and padlock design for in-situ sequencing

Speciesprimer ⭐ 26

The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.

Primavera ⭐ 25

🌸 Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.

Circtools ⭐ 22

circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

Primerminer ⭐ 22

R mased batch sequence downloader, with primer development and in silico evaluation capabilities

Barcodefinder ⭐ 20

all-in-one solution for discovering novel DNA barcode

Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.

Miprimer ⭐ 13

Webapp for design DNA primers for miRNA qPCR process

Primerserver ⭐ 8

Obsolete!! Begin to turn to PrimerServer2

Use GitHub to facilitate automation, collaboration and reproducibility in your machine learning workflows.

Primerdriver ⭐ 6

PrimerDriver - Automated design of mutagenic PCR primers

Gene Sequence Primer ⭐ 5

Gene and Primer Sequence Analysis for SARS-CoV-2, EGFR(Non Small Lung Cancer Cell), Influenza DNAs ### How can I check my Oligo primers to ensure there are no significant primer design issues? - The difference between melting temperatures (Tm) of the primers should be less than 5°C. - The GC content should be between 35-80% or equivalent to the product being amplified. - The Delta G value of any self-dimers, hairpins, and heterodimers should be weaker (more positive) than -9.0 kcal/mole. Posit

🚀 Project management and communication tool for teams.

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