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Search results for plot genome
genome
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plot
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31 search results found
Pygenometracks
⭐
654
python module to plot beautiful and highly customizable genome browser tracks
Samplot
⭐
458
Plot structural variant signals from many BAMs and CRAMs
Karyoploter
⭐
278
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
Checkm
⭐
235
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Merqury
⭐
234
k-mer based assembly evaluation
Ngs_learning
⭐
131
生物信息学交流资料
Dgenies
⭐
85
Dotplot large Genomes in an Interactive, Efficient and Simple way
Mummer2circos
⭐
79
Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments
Jupiterplot
⭐
54
A Circos-based tool to visualize genome assembly consistency
Dot
⭐
43
Dot: An interactive dot plot viewer for comparative genomics
Pauvre
⭐
43
Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.
Allhic
⭐
41
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
Blobology
⭐
40
Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step (NO LONGER MANTAINED)
Gtrellis
⭐
36
Genomic plot in trellis layout
Genomeuplot
⭐
32
The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.
Reconcnv
⭐
18
visualize CNV data from targeted capture based sequencing data
Pipe4c
⭐
17
4C-seq processing pipeline
Chromeister
⭐
16
A dotplot generator for large chromosomes
Opqua
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16
Epidemiological modeling framework for pathogen population genetics and evolution.
Pafr
⭐
14
Read, manipulate and visualize 'Pairwise mApping Format' data in R
Bs3
⭐
14
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
Prophagepredictioncomparisons
⭐
14
Comparisons of multiple different prophage predictions
Amplicon_coverage_plot
⭐
12
interactive barplot for amplicon sequencing
Bolotie
⭐
11
SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity
Zbrowse
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11
Plot2do
⭐
11
A tool to assess the quality and distribution of genomic data
Asgart
⭐
10
A genome-scale, fast, and precise segmental duplications mapping tool
Accusyn
⭐
9
AccuSyn: An Accurate Web-based Genome Synteny Browser
Python Genome Browser
⭐
9
Tools for making plots of genomic datasets in a genome-browser-like format
Cnvplot
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9
Plot CNV data with a genome viewer in R
Scurgen
⭐
9
A tool for detecting patterns in genomic data with space filling curves
Recan
⭐
9
genetic distance plotting for recombination events analysis
Alfa
⭐
9
ALFA: Annotation Landscape for Aligned Reads
Genome_coverage_plotter
⭐
8
Simple script to generate whole-genome coverage plots
Racer
⭐
8
An R package for generating comparative regional association plots
Mutation_rainstorm
⭐
7
Compute points for a cohort-wide variation on rainfall plots ("rainstorms") and identify mutation peaks
Afplot
⭐
6
Plot allele frequencies in VCF files
Seqcode
⭐
5
Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data
Multigenomiccontext
⭐
5
multiGenomicContext is a pipeline to see your protein in many genomic context as much as gbk you have.
Plot Vcf
⭐
5
visual analysis of your VCF files
Plotcnv
⭐
5
An R package to create a pretty Copy Number Variant plot from a segments file
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1-31 of 31 search results
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