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Search results for pipeline singularity

13 search results found

Nextflow ⭐ 2,447

A DSL for data-driven computational pipelines

Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

Nanopype ⭐ 78

Snakemake pipelines for nanopore sequencing data archiving and processing

Master_of_pores ⭐ 77

Nextflow pipeline for analysis of direct RNA Nanopore reads

Master of Pores 2

Porefile ⭐ 19

A Nextflow full-length 16S profiling pipeline for ONT reads

Genome Seek ⭐ 12

Clinical Whole Genome Sequencing Pipeline

Gomap Singularity ⭐ 10

GOMAP-Singularity is the containerized version of GOMAP

Tostadas ⭐ 10

🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission

A comprehensive quality-control and quantification RNA-seq pipeline

Ngs580 Nf ⭐ 7

Target exome sequencing analysis for NYU NGS580 gene panel

Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives

AllMine, a flexible pipeline for Allele Mining. Develloped at INRA's GAFL unit :

An awesome Oxford Nanopore Pipeline for direct RNA-sequencing

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