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Search results for pathways
pathways
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37 search results found
Llm App
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1,573
LLM App is a production framework for building and serving AI applications and LLM-enabled real-time data pipelines.
Pathway
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1,118
Pathway is a high-throughput, low-latency data processing framework that handles live data & streaming for you. Made with ❤️ for Python & ML/AI developers.
Ggkegg
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164
Analyzing and visualizing KEGG information using the grammar of graphics
Pathfindr
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158
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
Pypath
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115
Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.
Pathpy
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102
pathpy is an OpenSource python package for the modeling and analysis of pathways and temporal networks using higher-order and multi-order graphical models
Omnipathr
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80
R client for the OmniPath web service
Caleydo
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57
Caleydo - Visualization for Molecular Biology
Pathway Mapper
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52
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Msigdbr
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52
MSigDB gene sets for multiple organisms in a tidy data format
Newt
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48
A web application to visualize and edit pathway models
Sbgnviz.js
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33
A web based visualization tool for process description maps in SBGN
Noctua
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33
Graph-based modeling environment for biology, including prototype editor and services
Aibecs.jl
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32
The ideal tool for exploring global marine biogeochemical cycles.
Causalpath
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27
A project for exploring differentially active signaling paths related to proteomics datasets
Pathway Benchmarks
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26
Benchmarks for data processing systems: Pathway, Spark, Flink, Kafka Streams
Pathfinder
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22
Pathfinder is a tool for the visual exploration of paths in large graphs.
Genescf_inactive
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20
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
Kegg Crawler
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18
A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
Pathme
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17
Harmonizing pathway databases using Biological Expression Language (BEL)
Biocor
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14
Package to calculate functional similarity between genes https://biocor.llrs.dev
Chise.js
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14
A web application to visualize and edit the pathway models represented by SBGN Process Description Notation
Cobamp
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13
Constraint-based modeling framework for the enumeration of pathway analysis concepts
Pathway
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13
Map your organisation's pathway to open data success
Rwikipathways
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12
R package for WikiPathways API
Photon
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11
PHOsphoproteomic dissecTiOn using Networks
Noctua Models
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10
This is the data repository for the models created and edited with the Noctua tool stack for GO.
Kegg
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9
A Bio2BEL package for integrating pathway-related information from KEGG in BEL
Pathways2go
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9
Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)
Compath Resources
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7
This repository contains the different resources derived or generated using ComPath
Developer Hub
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7
Awell's Developer Hub website.
Pathwaymatcher_dev
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6
PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://github.com/PathwayAnalysisPlatform/Pathway
Syblars
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6
SyBLaRS: Systems Biology Layout & Rendering Service
Compath
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6
A web application for exploring, analyzing, and curating pathway databases
Apear
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5
Enrichment Networks for Pathway Enrichment Analysis
Gocam Sif Pyexport
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5
Export GO-CAMs to SIF (Python)
Moocoke
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5
Learn from MOOC like doing coke, but do not really coke
1-37 of 37 search results
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