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Search results for molecular dynamics amber
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molecular-dynamics
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6 search results found
Openff Toolkit
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286
The Open Forcefield Toolkit provides implementations of the SMIRNOFF format, parameterization engine, and other tools. Documentation available at http://open-forcefield-toolkit.readthedocs.io
Moltemplate
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186
A general cross-platform tool for preparing simulations of molecules and complex molecular assemblies
Ommprotocol
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20
A command line application to launch molecular dynamics simulations with OpenMM
Longbow
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17
Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.
Complexmixtures.jl
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12
Package to perform minimum-distance distribution analyses of complex solute-solvent interactions
Cnt Gaff
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6
Build atomistic structures of carbon nanotubes with the possibility to add functional groups (OH, COOH, COO-) and assigns generalized Amber (GAFF) parameters to them.
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1-6 of 6 search results
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