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Python package for signal processing, with emphasis on iterative methods

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.

Medicaldiffusion ⭐ 70

Medical Diffusion: This repository contains the code to our paper Medical Diffusion: Denoising Diffusion Probabilistic Models for 3D Medical Image Synthesis

A flexible ML framework built to simplify medical image reconstruction and analysis experimentation.

Repository for the Stanford Knee MRI Multi-Task Evaluation (SKM-TEA) Dataset

Prostatex_masks ⭐ 46

Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.

Data Consistency Toolbox for Magnetic Resonance Imaging

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

Im2im Uq ⭐ 29

Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.

Brain Mri Segmentation ⭐ 25

Smart India Hackathon 2019 project given by the Department of Atomic Energy

Tensorflow Mri ⭐ 21

A Library of TensorFlow Operators for Computational MRI

Brainagepredictionresnet ⭐ 20

3D residual neural network that predicts age based on brain MRI images (implemented using TensorFlow 2).

Neuroml2020 ⭐ 20

Machine Learning in Neuroimaging data, Fall 2020.

Subpixel Embedding Segmentation ⭐ 20

PyTorch Implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedding (ORAL, MICCAIW 2021)

Utilities and tools for machine learning on BOLD-fMRI data

Swinganmr ⭐ 9

Official implementation of SwinGANMR

Machine Learning Portfolio ⭐ 7

Assorted machine learning implementations for medical data

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