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6 search results found

Graphein ⭐ 932

Protein Graph Library

Pyrosetta.notebooks ⭐ 399

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

Fitness landscape exploration sandbox for biological sequence design.

A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design

Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)

Proteinsolver ⭐ 12

Graph neural network capable of generating novel amino acid sequences that fold into proteins with predetermined topologies.

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