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Search results for jupyter notebook cell segmentation

cell-segmentation x

jupyter-notebook x

8 search results found

Hiformer ⭐ 86

HiFormer: Hierarchical Multi-scale Representations Using Transformers for Medical Image Segmentation (WACV 2023)

Impartial ⭐ 28

Interactive deep learning whole-cell segmentation and thresholding using partial annotations

Cell_segmentation_and_tracking ⭐ 20

For cell segmentation and tracking.

Clustermap ⭐ 18

ClusterMap for multi-scale clustering analysis of spatial gene expression

3dcellseg ⭐ 8

Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (However, I think the title should be "3DCellSeg - a robust deep learning-based 3D cell instance segmentation pipeline".)

Bmen4460 Nb1 Simple_cell_segmentation_with_a_single_layered_perceptron ⭐ 6

Child repository of Deep-learning-with-PyTorch-and-GCP

Cellsegmentationtracker ⭐ 5

A Python module intended to make cell segmentation, tracking and subsequent (mostly biophysical) statisticial analysis easy

Amazon Sagemaker Cell Segmentation Workshop ⭐ 5

This workshop outlines a machine-learning cell segmentation architecture from scratch for the life-sciences vertical, using Amazon SageMaker, S3, Lambda and SageMaker Inference endpoints

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